Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04627 and RBAM_028510
See
Amino acid alignment /
Visit
BSNT_04627 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence dna-align/BSNT_04627___alaR.1.9828.seq
# -bsequence dna-align/RBAM_028510___alaR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04627___alaR-RBAM_028510___alaR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04627___alaR-RBAM_028510___alaR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04627___alaR
# 2: RBAM_028510___alaR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 502
# Identity: 402/502 (80.1%)
# Similarity: 402/502 (80.1%)
# Gaps: 2/502 ( 0.4%)
# Score: 1598.0
#
#
#=======================================
BSNT_04627___ 1 ATGAAATTGACAGAAAAAGAAACAGAAATATTAGAAATTTTAGACGAAAA 50
|||||..||||.||||||||||||||||||||||||||||||||||||||
RBAM_028510__ 1 ATGAAGCTGACCGAAAAAGAAACAGAAATATTAGAAATTTTAGACGAAAA 50
BSNT_04627___ 51 CAGCCGCGCCGATTTAGAAACAATCGCAAAGATGGCGGGCA-TCCCTGTA 99
||||||||..|||...|||||.||.||.||.|||||...|| ||||..|.
RBAM_028510__ 51 CAGCCGCGTTGATGCGGAAACGATTGCGAAAATGGCAAACATTCCCGCTG 100
BSNT_04627___ 100 AATGAAGTAAAAACAATTATTGACAAACTGGAGAAAGAAAAGGTTATTAT 149
|| |||||.||||..||.|||||.||.||.||.||.|||||.||.||.||
RBAM_028510__ 101 AA-GAAGTCAAAAGCATCATTGAAAAGCTTGAAAAGGAAAAAGTCATCAT 149
BSNT_04627___ 150 CGATTATTCCGCTATGATTGATTGGCGAAAAGTAGACGGACATGAGGGCG 199
.||||||.|.||.|||||.||.|||||.|||||.|||||....||.||||
RBAM_028510__ 150 TGATTATGCGGCGATGATCGACTGGCGCAAAGTCGACGGTTTGGAAGGCG 199
BSNT_04627___ 200 TTACGGCCATGATCGACGTCAAAGTAACGCCGAAGCGGGGCGTCGGTTTT 249
|.|||||.|||||.|||||.|||||.||.|||||.||....|||||.|||
RBAM_028510__ 200 TCACGGCGATGATTGACGTAAAAGTCACTCCGAAACGAAATGTCGGCTTT 249
BSNT_04627___ 250 GATGAAGTGGCGGAACGGATTTACCGATTCCAAGAGGTTGAATCAGTTTA 299
||||||||.||.||.|||||.|||.|||||||.||.|||||||||||.||
RBAM_028510__ 250 GATGAAGTCGCTGAGCGGATATACAGATTCCAGGAAGTTGAATCAGTGTA 299
BSNT_04627___ 300 CCTGATGTCAGGCGTATACGATTTGTCTGTCGTGATTCGCGGCAATTCGA 349
||||||||||||.||.||.||.||.||.|||||.|||||||||||..|||
RBAM_028510__ 300 CCTGATGTCAGGGGTGTATGACTTATCCGTCGTTATTCGCGGCAACACGA 349
BSNT_04627___ 350 TGTCTGACGTAGCGCGTTTTGTTTCGGATAAACTCTCAACGCTTGATTCA 399
||||.|||||.||..|.||.||.||.||.|||.|.||.||.|||||.||.
RBAM_028510__ 350 TGTCAGACGTGGCAAGCTTCGTGTCTGAAAAATTGTCCACCCTTGAGTCT 399
BSNT_04627___ 400 GTTGTTTCTACGACAACCCATTTTATCCTGAAAAAATACAAGCATGACGG 449
||.|||||.||||||||.||.||.||||||||||||||.|||||||||||
RBAM_028510__ 400 GTCGTTTCCACGACAACGCACTTCATCCTGAAAAAATATAAGCATGACGG 449
BSNT_04627___ 450 CAAAGTGTTTGAAACAGGAGACGACGACAAAAGAATCGTGGTGTCACCGT 499
||||||.|||||||..||||||||.||||||||||||||||||||.||||
RBAM_028510__ 450 CAAAGTCTTTGAAAGCGGAGACGATGACAAAAGAATCGTGGTGTCTCCGT 499
BSNT_04627___ 500 AA 501
||
RBAM_028510__ 500 AA 501
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.