Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04639 and RBAM_028590
See
Amino acid alignment /
Visit
BSNT_04639 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:06
# Commandline: needle
# -asequence dna-align/BSNT_04639___pbpD.1.9828.seq
# -bsequence dna-align/RBAM_028590___pbpD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04639___pbpD-RBAM_028590___pbpD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04639___pbpD-RBAM_028590___pbpD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04639___pbpD
# 2: RBAM_028590___pbpD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1891
# Identity: 1500/1891 (79.3%)
# Similarity: 1500/1891 (79.3%)
# Gaps: 38/1891 ( 2.0%)
# Score: 5958.0
#
#
#=======================================
BSNT_04639___ 1 ------ATGTTACGAAAAATAATCGGATGGATTTTGCTCCTTTGCATAAT 44
|||.||||.|||||||||||||||||||||||.||..||||.||
RBAM_028590__ 1 GTGACCATGGTACGTAAAATAATCGGATGGATTTTGCTGCTCGGCATTAT 50
BSNT_04639___ 45 CCCATTGTTTGCATTTACAGTTATCGCTTCCGGAAAAGAAGTAAAACAAA 94
|||.||||.|||||||||||||||.||||||||.|||||.||||||||||
RBAM_028590__ 51 CCCGTTGTGTGCATTTACAGTTATTGCTTCCGGCAAAGAGGTAAAACAAA 100
BSNT_04639___ 95 TGAAGTCCCTGGATCAGGTGCTTGATAAAAATATTAATCTGAAAGATATC 144
|.|||.|..|.|||||||||||.||||||.|||||.||.|.||||..|||
RBAM_028590__ 101 TCAAGCCTTTTGATCAGGTGCTCGATAAACATATTGATTTAAAAGCGATC 150
BSNT_04639___ 145 AGCCTTGTTCAGAACAGCTACATGTATGACAGGGACGGCTCCCTTGTCTC 194
|.|||.|||||.|||||.||||||||||||||||||||...||||||.||
RBAM_028590__ 151 AACCTGGTTCAAAACAGTTACATGTATGACAGGGACGGAAGCCTTGTTTC 200
BSNT_04639___ 195 GGAAATCGTCAGCGACCACGAAAACCGTGTGCTCGTTCCATTTAACAACA 244
.||.||.||||||||.||.||.|||||.|||.||||.||.|||||.||.|
RBAM_028590__ 201 TGAGATTGTCAGCGATCATGAGAACCGCGTGATCGTGCCCTTTAATAAAA 250
BSNT_04639___ 245 TTCCCGAGGAAGTCAAACAGATTTTCTTAACATCTGAGGACCGCCATTTT 294
|.||..|.||.||.|||||..|.||.|||||.|||||.|||||.||||||
RBAM_028590__ 251 TACCGAATGAGGTAAAACAACTGTTTTTAACCTCTGAAGACCGTCATTTT 300
BSNT_04639___ 295 TACGAGCATAAAGGCTTTGACTTTATGGGAATGGTGCGGGCTACTGCTTC 344
||.|||||||||||.||||||||||||||.|||||..||||..|.||.||
RBAM_028590__ 301 TATGAGCATAAAGGGTTTGACTTTATGGGGATGGTCAGGGCGGCCGCCTC 350
BSNT_04639___ 345 TAACGTAAAAGACAAGAAAATTGACCAGGGTGCCAGCACCATCACACAGC 394
.||..|.|||||..|.||||||||.|||||.||||||||||||||.||||
RBAM_028590__ 351 CAATTTCAAAGATCATAAAATTGATCAGGGCGCCAGCACCATCACCCAGC 400
BSNT_04639___ 395 AGCTTTCAAGAAACTTATATTTGAGCCACGAACGCTCCTTCAGCCGCAAG 444
||||..||||.||..|.|||||.|||||.||||||.||||||||||.||.
RBAM_028590__ 401 AGCTGGCAAGGAATGTGTATTTAAGCCATGAACGCACCTTCAGCCGAAAA 450
BSNT_04639___ 445 CTGACAGAGCTCGCGTATTCCTATCAGCTGGAGAAAAAATATACGAAAAA 494
|||||.|||||.||.||||||||||||||.|||||||||||.|..|||.|
RBAM_028590__ 451 CTGACGGAGCTGGCCTATTCCTATCAGCTTGAGAAAAAATACAGCAAAGA 500
BSNT_04639___ 495 TGAAATTCTTGAAGCTTACTTAAATACCATTTATTTTAACAATGGTGTTT 544
|||.|||.|.||||..|||||||||||.|||||||||||.||.||.||.|
RBAM_028590__ 501 TGAGATTTTAGAAGGCTACTTAAATACGATTTATTTTAATAACGGCGTAT 550
BSNT_04639___ 545 ATGGCGTCGGTTCAGCAGCTCAATTCTATTTCAGCAAACCGCTGAAATCT 594
|.||.||||||||.||.||.|||||.|||||||||||.||||||||||||
RBAM_028590__ 551 ACGGTGTCGGTTCGGCGGCACAATTTTATTTCAGCAAGCCGCTGAAATCT 600
BSNT_04639___ 595 CTCACAGTGGGAGAAATGGCTTTTATCTGTGCTATACCTAATAATCCTAC 644
|||||..|||||||||||||.||||||||.||.||.||||||||.|||||
RBAM_028590__ 601 CTCACTTTGGGAGAAATGGCCTTTATCTGCGCCATCCCTAATAACCCTAC 650
BSNT_04639___ 645 ATTATATGATCCTCTCAAGCATTTTGACTACACGAAAAGCCGTCAAGAAC 694
|||||||||||||||||||||||||||.||.|||||||..||.||||...
RBAM_028590__ 651 ATTATATGATCCTCTCAAGCATTTTGATTATACGAAAAAACGACAAGTCA 700
BSNT_04639___ 695 GTTTGCTTAAAGGGCTAAAAGATGCCGGGGTCAT-TACGGACAAAGAGCT 743
|.||||||||.||..|||||.|.||.||.||.|| |.||| .|||.||||
RBAM_028590__ 701 GATTGCTTAACGGATTAAAAAAAGCAGGTGTTATATCCGG-GAAACAGCT 749
BSNT_04639___ 744 GAAAAAAGCCGTAAAACAAAAAATCAAACTGGATGTTGAAAAAAGAGAAG 793
|||||||||||.|||..||||.|||||.||.||| |.|||.||.||.
RBAM_028590__ 750 GAAAAAAGCCGAAAAGGAAAAGATCAAGCTTGAT----ATAAACGAAAAA 795
BSNT_04639___ 794 AC----AAATATCCTGACTACGTTTCCTACGTCAATGATGAATTCACTCA 839
|| ||||||||||||||.||||||||.||.||||||||||||||.||
RBAM_028590__ 796 ACAAATAAATATCCTGACTATGTTTCCTATGTAAATGATGAATTCACACA 845
BSNT_04639___ 840 GCTGGTGTCTGAATCAGAAGGCTTTGATAAACGCCTTCAAAAAGCATCAG 889
|||.||.||...|||.|||||||.|||.|||||.|||.|||||||.||.|
RBAM_028590__ 846 GCTTGTTTCATCATCCGAAGGCTATGACAAACGTCTTGAAAAAGCTTCCG 895
BSNT_04639___ 890 GA------AAACAAAAAGAAAAGA-TCGAAAACGAGCTGTCCGCAAGAGT 932
|| |||||||||..|.||| | |||||.||.|..|||||
RBAM_028590__ 896 GAAAGGCGAAACAAAAAATACAGAGT-------GAGCTTTCAGACAGAGT 938
BSNT_04639___ 933 CAGCACGCTGATGAAAGACGGCGTGAAAATTTATACTGCACTTGATCCGT 982
||||||..||.|.||||||||||||||.||||||||.||.||..||||||
RBAM_028590__ 939 CAGCACATTGTTAAAAGACGGCGTGAAGATTTATACGGCGCTGAATCCGT 988
BSNT_04639___ 983 ACATGCAAAATCAAGTTGTGGCACAAATGAATTCCAAGCTCCCGTATGCG 1032
|.||||||||.||.||.||.||.|||.|||||...||.||.||||||||.
RBAM_028590__ 989 ATATGCAAAACCAGGTCGTCGCCCAAGTGAATCAAAATCTGCCGTATGCA 1038
BSNT_04639___ 1033 GACGTACAGGGCGGAGCGGCTGTGATTAATCACCAGACGCATCAAATCAT 1082
|.|||.||||||||||||||.|||||||||||.|||||.|||||.||.||
RBAM_028590__ 1039 GGCGTCCAGGGCGGAGCGGCCGTGATTAATCATCAGACACATCAGATTAT 1088
BSNT_04639___ 1083 CGCTCTATCCGGCGGGAAAAACTATCAAAAATATGACTTTAACCGCGCCT 1132
|||.||.||.|||||||||.|.||.||.||||||||.||.|||||.||||
RBAM_028590__ 1089 CGCGCTTTCAGGCGGGAAAGATTACCATAAATATGATTTCAACCGTGCCT 1138
BSNT_04639___ 1133 ACCAGGCGTACAGGCAGCCGGGTTCATCCATTAAGCCGCTTCTTGATTAC 1182
|.|||||.|||||.|||||.||||||||||||||||||||.|||||||||
RBAM_028590__ 1139 ATCAGGCATACAGACAGCCCGGTTCATCCATTAAGCCGCTGCTTGATTAC 1188
BSNT_04639___ 1183 GGCCCTTATATTGAACAGACCGGCGCGACAGCAAGCAGCACAATTGATGC 1232
||.|||||.||||||.||||||||||.||..||..|||||..|||||.||
RBAM_028590__ 1189 GGACCTTACATTGAAAAGACCGGCGCAACGCCACACAGCAAGATTGACGC 1238
BSNT_04639___ 1233 CAGCAAGTTTTGCAGCAAAGACTACTGTCCGCAAAACTACAATAACCGCA 1282
.|||||.||.|||||....||.|||||.||||||||||||||||||||||
RBAM_028590__ 1239 AAGCAAATTCTGCAGTGCGGATTACTGCCCGCAAAACTACAATAACCGCA 1288
BSNT_04639___ 1283 CTTACGGCACAGTGACGCTTGATACGGCGTTTAAAAATTCATATAATACC 1332
|.|||||.||.||.|||||.||.||||||||||||.|.||.||.||.||.
RBAM_028590__ 1289 CGTACGGTACGGTCACGCTGGAAACGGCGTTTAAATACTCGTACAACACA 1338
BSNT_04639___ 1333 CCGGCTATTAGAATGCTCGACCGCGTCGGCATCCAAAAGGCATTCAGTTA 1382
|||||.||.|||||..|.||||||||||||.||.|.|||||.|||||.||
RBAM_028590__ 1339 CCGGCCATCAGAATCATGGACCGCGTCGGCGTCAATAAGGCGTTCAGCTA 1388
BSNT_04639___ 1383 TATTGAGCCGTATCATTTTGCCAAACTTGTCGACAGTGACTATCTTCTTC 1432
..||||.||||.||||||.||.||.||.|||..|...||.||.|.|||.|
RBAM_028590__ 1389 CCTTGAACCGTTTCATTTCGCGAAGCTGGTCAGCGCGGATTACCGTCTGC 1438
BSNT_04639___ 1433 CGGCGGCGCTTGGCGGATTTACAAACGGCATGACGCCTCTTGAGATGACA 1482
|.||||||||||||||.|||||||||||||||||.||.|||||.|||||.
RBAM_028590__ 1439 CTGCGGCGCTTGGCGGTTTTACAAACGGCATGACTCCGCTTGAAATGACC 1488
BSNT_04639___ 1483 AAGGCTTATACGACATTCGGCAACAGCGGAAGCTATACGCCGAGCCATGC 1532
||.||.||.||.||.||||||||||.|||....|||||||||||.||.||
RBAM_028590__ 1489 AATGCGTACACCACGTTCGGCAACAACGGCGTTTATACGCCGAGTCACGC 1538
BSNT_04639___ 1533 GATTACAAAGGTGACAGACCTAAAAGGAAAAACGCT-TTATAAATGGAAT 1581
|||||||||.|||||.||..||||||||||||||.| ||| ||||||||.
RBAM_028590__ 1539 GATTACAAAAGTGACTGATTTAAAAGGAAAAACGATATTA-AAATGGAAA 1587
BSNT_04639___ 1582 GATAAAGCGACTCAAATATTCAGCGTCCGCACGAACATGCAGCTGAAAAA 1631
|||.|..||||.||..||||||||||.||.||.|||||||||.|.|||.|
RBAM_028590__ 1588 GATGAGCCGACGCAGGTATTCAGCGTGCGGACCAACATGCAGATCAAAGA 1637
BSNT_04639___ 1632 ACTGATGTCGTCCGTTGTGAAAAGCGGAACAGGGAAAAAAGCATATTTCA 1681
|.|||||....||||.||.||.|||||.|||||.||.|||||..|.||.|
RBAM_028590__ 1638 AATGATGAAAGCCGTCGTCAAGAGCGGTACAGGAAAGAAAGCGAACTTTA 1687
BSNT_04639___ 1682 ATGCGCCTTACATCGGCGGTAAAACCGGAACATCAAATGATTATCACGAT 1731
|.||.||.|||.|||||||.|||.|.|||||.||||||||.|||||||||
RBAM_028590__ 1688 AAGCTCCGTACGTCGGCGGAAAATCAGGAACGTCAAATGACTATCACGAT 1737
BSNT_04639___ 1732 ATGTGGTTTGTCGGCCTGACTGATACGTATACAATGGGTGTCTGGGTCGG 1781
||||||||||||||||||||.||..|.|||||.|||||.||.||||||||
RBAM_028590__ 1738 ATGTGGTTTGTCGGCCTGACGGACGCTTATACGATGGGGGTATGGGTCGG 1787
BSNT_04639___ 1782 AAAGGACACACCGACCAGCGTTGAATATCTTC---ACAGCATCAGCCCTC 1828
.|||||.||||||.|.|||||.|||||.|||| || ||| |||||||
RBAM_028590__ 1788 CAAGGATACACCGTCAAGCGTCGAATACCTTCATGAC-GCA--AGCCCTC 1834
BSNT_04639___ 1829 AGCTTTCCATCTGGAAAGGAACGCTGCAAGCGGCTTATTAA 1869
|||||||.|||||||||...||||||||.||.|||||||||
RBAM_028590__ 1835 AGCTTTCGATCTGGAAAAACACGCTGCAGGCAGCTTATTAA 1875
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.