Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04647 and RBAM_028660
See
Amino acid alignment /
Visit
BSNT_04647 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:06
# Commandline: needle
# -asequence dna-align/BSNT_04647___yufP.1.9828.seq
# -bsequence dna-align/RBAM_028660___yufP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04647___yufP-RBAM_028660___yufP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04647___yufP-RBAM_028660___yufP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04647___yufP
# 2: RBAM_028660___yufP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1050
# Identity: 811/1050 (77.2%)
# Similarity: 811/1050 (77.2%)
# Gaps: 6/1050 ( 0.6%)
# Score: 3063.0
#
#
#=======================================
BSNT_04647___ 1 ATGGTTAAACGACTCTCTCAT-TTACTCGTGCCGCTCATCGCAATCATCC 49
|||.||||.|||||.|||||| |..|| ||||||||.||.||.|||||||
RBAM_028660__ 1 ATGATTAATCGACTTTCTCATCTGGCT-GTGCCGCTGATTGCGATCATCC 49
BSNT_04647___ 50 TTGGTCTTGCGGCCGGCGCGTTGATTATGCTTGTGAGCGGCTACAGTGTG 99
||||..|.||.||.||.|||.|.||.|||||.|..||||||||||.|||.
RBAM_028660__ 50 TTGGATTAGCTGCGGGTGCGGTCATCATGCTCGCCAGCGGCTACAATGTC 99
BSNT_04647___ 100 GCTAGCGGATATTCGGCTTTGTGGAATGGGATATTCGGAGAAATCTATTA 149
|..|||||.|||||||||.|.||||..||.||.|||||.|||.|.|||||
RBAM_028660__ 100 GTAAGCGGGTATTCGGCTCTTTGGAGCGGCATTTTCGGTGAAGTGTATTA 149
BSNT_04647___ 150 TGTCGGAGAAACAATCCGGCAAATTACGCCTTATATTTTATCCGGATTGG 199
..||||.|||.|.||||||||.||||||||.|||||||||||||||||||
RBAM_028660__ 150 CATCGGGGAATCGATCCGGCAGATTACGCCATATATTTTATCCGGATTGG 199
BSNT_04647___ 200 CTGTCGCCTTTGCATTCCGAACCGGACTCTTTAATATCGGCGTCGAGGGA 249
|.||.||.||.|||||.||.|||||.||.|||||||||||.||.||.|||
RBAM_028660__ 200 CCGTGGCATTCGCATTTCGGACCGGCCTGTTTAATATCGGGGTTGAAGGA 249
BSNT_04647___ 250 CAGCTGCTCGTCGGCTGGACAGCAGCGGTTTGGGTCGGTACGGCGTTTGA 299
|||||.||.|||||||||||.||.|||||.||||||||..|..|.|||||
RBAM_028660__ 250 CAGCTCCTTGTCGGCTGGACCGCCGCGGTGTGGGTCGGCGCTTCCTTTGA 299
BSNT_04647___ 300 CGGACCGGCATATATTCACTTGCCGCTCGCATTGATT-ACAGCGGCAGCT 348
||..||.||.||.||.|||.|.|||||..|.|| ||| .|.||.||.|||
RBAM_028660__ 300 CGCCCCCGCTTACATCCACCTTCCGCTTTCGTT-ATTGGCGGCTGCGGCT 348
BSNT_04647___ 349 GCAGGAGG-ATTATGGGGGTTTATTCCCGGCATTTTGAAAGCGCGATTTT 397
||.||.|| ||| |||||..|.||||||||..||||.|||||.||.||||
RBAM_028660__ 349 GCGGGCGGCATT-TGGGGCCTGATTCCCGGATTTTTAAAAGCCCGTTTTT 397
BSNT_04647___ 398 ACGTTCATGAAGTCATTGTCACCATTATGATGAATTATATCGCGCTGCAC 447
..||.||.|||||.||||||||.||.|||||||||||||||||.||.||.
RBAM_028660__ 398 TTGTCCACGAAGTGATTGTCACGATCATGATGAATTATATCGCTCTTCAT 447
BSNT_04647___ 448 ATGACCAATTACATCATTTCAAACGTCTTGACAGATCATCAGGACAAGAC 497
.|.||||||||..|||||||..|.|||.||||.||.||.|.||||||.||
RBAM_028660__ 448 TTAACCAATTATCTCATTTCCGATGTCATGACGGACCACCGGGACAAAAC 497
BSNT_04647___ 498 GGGGAAAATTCACGAATCCGCCTCCCTCCGCTCTCCTTTTCTTGAACAGA 547
.|..||||||||.|||..|||.||.||||||||.||.|||.|.||||||.
RBAM_028660__ 498 AGACAAAATTCATGAAAGCGCGTCGCTCCGCTCGCCGTTTTTAGAACAGC 547
BSNT_04647___ 548 TCACCGATTACTCACGGCTGCATTTGGGAATCATCGTTGCCCTTCTCGCA 597
|.||.||||||||.||.||.||.|.|||.||..|..||||.||..|.||.
RBAM_028660__ 548 TGACAGATTACTCCCGCCTTCACTGGGGCATTCTGATTGCTCTGTTTGCG 597
BSNT_04647___ 598 GCAGTTATCATGTGGTTTATCATCAACAAAACTACAAAAGGATTTGAGCT 647
|||||..||||||||||||||||..|.|||||.|.||..||||||||..|
RBAM_028660__ 598 GCAGTCCTCATGTGGTTTATCATTCATAAAACAAAAAGCGGATTTGAATT 647
BSNT_04647___ 648 CCGGGCGGTCGGGTTTAACCAGCACGCTTCCCAGTATGCCGGCATGAGCG 697
||||||.|||||.||||||||||||||..|.||.||.|||||.|||||||
RBAM_028660__ 648 CCGGGCTGTCGGCTTTAACCAGCACGCCGCACAATACGCCGGAATGAGCG 697
BSNT_04647___ 698 TGCGGAAGAATATCATGACCTCCATGCTTATCTCCGGCGCTTTTGCAGGC 747
|..|.||.|||||.|||..|.|||||.|.||.||||||||.||.||.||.
RBAM_028660__ 698 TCAGAAAAAATATGATGTACGCCATGATGATTTCCGGCGCCTTCGCGGGG 747
BSNT_04647___ 748 CTTGCCGGAGCCATGGAGGGGCTAGGAACATTCGAATACGCAGCAGTGAA 797
||||||||.||.|||||.||.||.|||||.||..|||||||.||.||.||
RBAM_028660__ 748 CTTGCCGGCGCGATGGAAGGACTCGGAACCTTTCAATACGCGGCGGTTAA 797
BSNT_04647___ 798 AGGCGCATTTACCGGCGTAGGCTTTGACGGTATCGCTGTCGCTCTTCTCG 847
.|||||.|||||||||||.|||||.|||||.||.||.||.||.|||||||
RBAM_028660__ 798 GGGCGCCTTTACCGGCGTCGGCTTCGACGGCATTGCAGTTGCGCTTCTCG 847
BSNT_04647___ 848 GGGGAAACACAGCCATCGGGGTTATACTGGCAGCATGCCTGCTTGGCGGG 897
|.||.|.|||.||.|||||.|||.|.|||||.|||||.||.||.|||||.
RBAM_028660__ 848 GCGGCAGCACGGCAATCGGCGTTGTTCTGGCGGCATGTCTTCTCGGCGGC 897
BSNT_04647___ 898 CTGAAAATCGGCGCATTAAATATGCCGATTGAATCAGGCGTTCCATCAGA 947
||.|||.||||.|||||||||||||||||||||||.||.||.||.||.||
RBAM_028660__ 898 CTTAAAGTCGGGGCATTAAATATGCCGATTGAATCCGGGGTGCCTTCTGA 947
BSNT_04647___ 948 GGTCGTTGATATTGTGATTGCTATTATTATTCTGTTTGTGGCTTCAAGCT 997
.||||||||.||.||.||.||.|||||||||.||||||||||.|||||||
RBAM_028660__ 948 AGTCGTTGACATCGTCATCGCCATTATTATTTTGTTTGTGGCATCAAGCT 997
BSNT_04647___ 998 ATGCGATTCGTTTCGTCATGGGCAAATTGAAGAAAAAGGGGGCGAACTAA 1047
|.||.||.|||.||.||.|.|..|||||||||||||||||||||||.|||
RBAM_028660__ 998 ACGCCATCCGTCTCATCCTTGATAAATTGAAGAAAAAGGGGGCGAAGTAA 1047
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.