Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04648 and RBAM_028670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:07
# Commandline: needle
# -asequence dna-align/BSNT_04648___yufQ.1.9828.seq
# -bsequence dna-align/RBAM_028670___yufQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04648___yufQ-RBAM_028670___yufQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04648___yufQ-RBAM_028670___yufQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04648___yufQ
# 2: RBAM_028670___yufQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 964
# Identity: 778/964 (80.7%)
# Similarity: 778/964 (80.7%)
# Gaps: 8/964 ( 0.8%)
# Score: 3155.0
#
#
#=======================================
BSNT_04648___ 1 GTGGACATTGTGCAGATTTTATCTATCATTGTCCCTGCAACACTCGTCTA 50
||||||.|..|||||||||||||.||.||||||||.|||||||||||.||
RBAM_028670__ 1 GTGGACTTCCTGCAGATTTTATCCATTATTGTCCCGGCAACACTCGTATA 50
BSNT_04648___ 51 TGCGGCCCCGCTTATTTTAACTGCTCTCGGCGGCGTGTTTTCCGAGAGAT 100
||||||.||||||||||||||.||||||||||||||||||||.||.||||
RBAM_028670__ 51 TGCGGCTCCGCTTATTTTAACCGCTCTCGGCGGCGTGTTTTCTGAAAGAT 100
BSNT_04648___ 101 CAGGTGTGGTGAATATCGGCCTAGAAGGCCTCATGATTATCGGGGCGTTC 150
|.||.||.||.||.|||||.||.|||||.||.|||||||||||.||.||.
RBAM_028670__ 101 CGGGAGTTGTCAACATCGGTCTTGAAGGACTGATGATTATCGGCGCCTTT 150
BSNT_04648___ 151 ACCAGCGTGTTATTTAATTTATTTTTTGGTCCGGAATTAGGTGCCGCCGC 200
||.|||||..|.||.||.||||||||.||.|..||..|.||.||||||||
RBAM_028670__ 151 ACAAGCGTCATGTTCAACTTATTTTTCGGACGCGAGCTTGGCGCCGCCGC 200
BSNT_04648___ 201 ACCTTGGCTTTCGCTCCT----TGCCGCCATGGCAGCAGGCGCCCTGTTT 246
.||.||||| |.||| |||.||.|||...||.||||..|||||.
RBAM_028670__ 201 TCCGTGGCT----CGCCTTGGCTGCGGCTATGATTGCCGGCGGACTGTTC 246
BSNT_04648___ 247 TCACTGATTCACGCGGCAGCGGCGATTTCGTTTCGCGCCGACCAGACAGT 296
||||||||.||||||||.||.|||.||||.||.||||||||.|||||.||
RBAM_028670__ 247 TCACTGATCCACGCGGCCGCCGCGGTTTCTTTCCGCGCCGATCAGACGGT 296
BSNT_04648___ 297 CAGCGGTGTCGCCATTAACATGCTGGCGCTTGGGGCAACTTTATTTATCG 346
.|.||||||.||.||.||.|||||.|||.|.||.||.||..|.|||||||
RBAM_028670__ 297 AACCGGTGTGGCGATCAATATGCTCGCGTTAGGAGCGACACTGTTTATCG 346
BSNT_04648___ 347 TCAAACTGATCTACGGCAAAGCGCAGACAGACAAAATTCCAGAGCCTTTT 396
||||.|||||||||||.||.||.|||||.||.|||||.||.|||||.|||
RBAM_028670__ 347 TCAAGCTGATCTACGGAAAGGCCCAGACTGATAAAATCCCGGAGCCCTTT 396
BSNT_04648___ 397 TATAAGACGAAAATCCCCGGTTTGGGCGATATTCCCGTCTTGGGAAAGAT 446
||.||.|||||.||.|||||.||..||||||||||.||.||.||||||||
RBAM_028670__ 397 TACAAAACGAACATTCCCGGGTTAAGCGATATTCCGGTTTTAGGAAAGAT 446
BSNT_04648___ 447 CTTCTTTTCGGATGTCTATTATACGTCTATTCTTGCAATAGCACTTGCCT 496
.||||||||.||.||.|||||||||||.|||.|.||.||.|.|||.||||
RBAM_028670__ 447 TTTCTTTTCCGACGTATATTATACGTCGATTTTAGCCATCGTACTGGCCT 496
BSNT_04648___ 497 TTATTTCCTGGTTTATCTTGTTCAAAACGCCGTTCGGCCTTCGTATCCGT 546
||.|||||||||||||.||.||||||||||||||||||||.||.||||||
RBAM_028670__ 497 TTGTTTCCTGGTTTATTTTATTCAAAACGCCGTTCGGCCTCCGCATCCGT 546
BSNT_04648___ 547 TCTGTCGGAGAGCATCCGATGGCGGCCGATACGATGGGAATCAACGTATA 596
||||||||.||.|||||||||||||||||||||||||||||||||||.|.
RBAM_028670__ 547 TCTGTCGGGGAACATCCGATGGCGGCCGATACGATGGGAATCAACGTGTT 596
BSNT_04648___ 597 TAAAATGCGCTACATCGGTGTGATGATCAGCGGATTGTTCGGCGGTCTCG 646
....||||||||.|||||.||.|||||||||||..||||||||||.||||
RBAM_028670__ 597 CGGCATGCGCTATATCGGCGTCATGATCAGCGGGCTGTTCGGCGGGCTCG 646
BSNT_04648___ 647 GCGGCGGCGTATATGCCTCCACAATTGCGCTTGATTTCACGCACTCTACC 696
|||||||.||||||||.|||||.||.||||||||||||||||||||.|||
RBAM_028670__ 647 GCGGCGGTGTATATGCTTCCACGATCGCGCTTGATTTCACGCACTCCACC 696
BSNT_04648___ 697 ATCTCCGGGCAAGGCTTTATCGCCCTGGCAGCGCTTGTATTCGGAAAATG 746
||.||||||||||||||||||||.||.||.|||||.||.|||||.|||||
RBAM_028670__ 697 ATTTCCGGGCAAGGCTTTATCGCTCTTGCCGCGCTGGTTTTCGGCAAATG 746
BSNT_04648___ 747 GCATCCGATCGGAGCACTGGGGGCCGCCCTGTTTTTCGGATTCGCCCAAA 796
||||||||||||.||.||.|||||.||.|||||.||||||||.||.||.|
RBAM_028670__ 747 GCATCCGATCGGCGCGCTCGGGGCTGCGCTGTTCTTCGGATTTGCGCAGA 796
BSNT_04648___ 797 GCTTAAGCATCATTGGATCGCTGCTCCCTCTTTTTAAAGACATACCAAAT 846
|.||.|||||.||.||.|||||..|.||.||.||.||||||||.||.|||
RBAM_028670__ 797 GTTTGAGCATTATCGGCTCGCTTTTGCCCCTGTTCAAAGACATTCCGAAT 846
BSNT_04648___ 847 GTGTATATGCTGATGGCTCCTTATGTCTTAACGATTCTCGCTTTAACCGG 896
||.||.|||||||||||||||||..|..|.||.||||||||..|..||||
RBAM_028670__ 847 GTATACATGCTGATGGCTCCTTACATTCTGACCATTCTCGCGCTTGCCGG 896
BSNT_04648___ 897 CTTTATCGGGCGGGCAGATGCGCCAAAAGCCAATGGCGTGCCTTATATTA 946
|||.|||||.||.||.||||||||.||||||||.|||.|.|||||.||||
RBAM_028670__ 897 CTTCATCGGCCGCGCGGATGCGCCTAAAGCCAACGGCATCCCTTACATTA 946
BSNT_04648___ 947 AAGGAAAAAGATAA 960
||||||||.|.|.|
RBAM_028670__ 947 AAGGAAAACGCTGA 960
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