Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04659 and RBAM_028740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:08
# Commandline: needle
# -asequence dna-align/BSNT_04659___mrpG.1.9828.seq
# -bsequence dna-align/RBAM_028740___mrpG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04659___mrpG-RBAM_028740___mrpG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04659___mrpG-RBAM_028740___mrpG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04659___mrpG
# 2: RBAM_028740___mrpG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 383
# Identity: 276/383 (72.1%)
# Similarity: 276/383 (72.1%)
# Gaps: 16/383 ( 4.2%)
# Score: 960.5
#
#
#=======================================
BSNT_04659___ 1 ATGATCGAAACCGCTAAA------GTCGTTGTGGCTGTATTCATTTTGCT 44
||||||||||.||.|||| ||||..|| .||||||| ||.|
RBAM_028740__ 1 ATGATCGAAATCGTTAAATGGGCCGTCGCCGT--TTGTATTC----TGAT 44
BSNT_04659___ 45 GGGTGCTCTTGTATGCCTCATTGCTTCATTTGGCGTACTTCGCCTTCCCG 94
|||..|.||..|.|||||..|.||.||.||.|||..|||..|.|||||.|
RBAM_028740__ 45 GGGATCGCTGATCTGCCTGGTCGCGTCTTTCGGCACACTCAGGCTTCCTG 94
BSNT_04659___ 95 ATGTGTTTACACGCGCTCATGCTGCTTCTAAAGGCTCAACATTGGGTGTC 144
||||||.|||.|||||.||.||..||||.||||||||.|||.|.||.||.
RBAM_028740__ 95 ATGTGTATACGCGCGCCCACGCCTCTTCAAAAGGCTCGACACTCGGCGTT 144
BSNT_04659___ 145 AATATGATTCTGCTTGGTGTCTTCTTCTATTTGTGGTTTGTGACGGGGGA 194
|||.||.|..||||.||.||.||...|||.||||||.|..||||.||.||
RBAM_028740__ 145 AATTTGGTATTGCTCGGGGTGTTAGGCTACTTGTGGATGCTGACCGGAGA 194
BSNT_04659___ 195 ACTCTCCGCTAAAATCCTGCTTGGGATTCTCTTTATCTTTATTACGTCGC 244
|.|.||.|..|||||.|||||.||.||..|.||||||.|..|.|||.|||
RBAM_028740__ 195 AATTTCTGTAAAAATACTGCTCGGCATCATTTTTATCCTGCTGACGGCGC 244
BSNT_04659___ 245 CTATCGGCGGGCACTTGATCTGCCGTGCTGCGTATAACTCCG--GCGTCA 292
|..||||.|.||||.|.||.|||.|.||.|||||.||.||.| |||.|
RBAM_028740__ 245 CGGTCGGAGCGCACCTCATATGCAGGGCCGCGTACAATTCGGGAGCGGC- 293
BSNT_04659___ 293 AGCTTGATGAGAGAAGCGTACAGGATGACTATAACGGAATCAGAAACTTT 342
|||||||.|.|||||||||||||||||.||.||.|||||||||||||||
RBAM_028740__ 294 -GCTTGATAAAAGAAGCGTACAGGATGATTACAAAGGAATCAGAAACTTT 342
BSNT_04659___ 343 GTGATTAAACGAAAAGAGGATTCTTATTTATAA 375
|||||.|||||||||||.|||||.|||||.|||
RBAM_028740__ 343 GTGATCAAACGAAAAGAAGATTCATATTTGTAA 375
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