Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04677 and RBAM_028870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence dna-align/BSNT_04677___yueG.1.9828.seq
# -bsequence dna-align/RBAM_028870___yueG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04677___yueG-RBAM_028870___yueG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04677___yueG-RBAM_028870___yueG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04677___yueG
# 2: RBAM_028870___yueG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity: 166/228 (72.8%)
# Similarity: 166/228 (72.8%)
# Gaps: 12/228 ( 5.3%)
# Score: 557.5
#
#
#=======================================
BSNT_04677___ 1 ATGCCTGCAATTGTGGGGCCGATTTATATCATGTCAGTT--ACGGGTAAT 48
|||||||||||||||||.|||||||||||.||| |||| .|.||..|.
RBAM_028870__ 1 ATGCCTGCAATTGTGGGACCGATTTATATTATG--AGTTTAGCCGGAGAC 48
BSNT_04677___ 49 GCCGCGGCAAGCTTTGGAGACATATTTGCGATTTCGCCCAAAAGCGTCGC 98
||.|||||.|||||.||.|||.|.|||||.|||||.||||||..|||.|.
RBAM_028870__ 49 GCTGCGGCGAGCTTCGGTGACGTGTTTGCCATTTCTCCCAAAGCCGTTGA 98
BSNT_04677___ 99 TCATTCAGGGGCGGGGTCAGGCGCATTTCAGCTT--GGTGATTTTGTGAA 146
.||.|||||.||||||.||||.||.||||| || ||.||||||||.||
RBAM_028870__ 99 CCACTCAGGCGCGGGGGCAGGGGCGTTTCA--TTCCGGAGATTTTGTCAA 146
BSNT_04677___ 147 GATTAACAACCAAA--CGAGTAAAACTCTCTTCGAAGATGCCGATATCAC 194
|.|.||.|..||| | ||.|||||.|.|||.|||||...||||.|...
RBAM_028870__ 147 -AGTCACTAATAAATTC-AGCAAAACGCGCTTTGAAGACATCGATGTGTT 194
BSNT_04677___ 195 TGATGAAACAGTTTCGTTTAACGGGTAA 222
|||.|||.|.|.||.||||||||.||.|
RBAM_028870__ 195 TGACGAACCTGATTGGTTTAACGCGTGA 222
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