Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04713 and RBAM_029070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:16
# Commandline: needle
# -asequence dna-align/BSNT_04713___yuiH.1.9828.seq
# -bsequence dna-align/RBAM_029070___yuiH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04713___yuiH-RBAM_029070___yuiH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04713___yuiH-RBAM_029070___yuiH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04713___yuiH
# 2: RBAM_029070___yuiH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 614
# Identity: 470/614 (76.5%)
# Similarity: 470/614 (76.5%)
# Gaps: 34/614 ( 5.5%)
# Score: 1817.0
#
#
#=======================================
BSNT_04713___ 1 ATGTATTTCGG---------AAAAACAAGACAGTCCGATCAATCTGGAAG 41
||||.|||||| |.||||||.||||||.||.| |||
RBAM_029070__ 1 ATGTTTTTCGGGAAAACGAAACAAACAAAACAGTCGGAAC-----GGA-- 43
BSNT_04713___ 42 AGTGCCGCCAAATCAAAACGTCACCACTTCATTTCCTGTGCTTCATACCG 91
|.||||||||.|||||.|||||.||....|||||.||||||||..|||
RBAM_029070__ 44 --TTCCGCCAAACCAAAATGTCACAACGAAGTTTCCCGTGCTTCACGCCG 91
BSNT_04713___ 92 GAGATGTCCCATATTACGAAGATATGACGAAATGGAATCTTCAAGTGTAC 141
||.||||.||.|||||.|||||||||.|.|||||||||||.|||||||||
RBAM_029070__ 92 GAAATGTTCCTTATTATGAAGATATGTCAAAATGGAATCTGCAAGTGTAC 141
BSNT_04713___ 142 GGTTTGGTTGACCATCCGATGCTGCTAAGCTTTGAAGATGTCAAAGCCTT 191
||..|.|||||||.|||.||||||.||||||||||||||.||||||||||
RBAM_029070__ 142 GGGCTTGTTGACCGTCCTATGCTGTTAAGCTTTGAAGATATCAAAGCCTT 191
BSNT_04713___ 192 TCCACGGTATGAATC------GAAAAATGACATTCATTGTGTCACGGGAT 235
||| ||||.| |||||||||.||||||||.||||||||.|
RBAM_029070__ 192 TCC------TGAAGCCGAAGTGAAAAATGATATTCATTGCGTCACGGGCT 235
BSNT_04713___ 236 GGTCAAGGCTTGATAATGTGTGGCAAGGCGTGCGGGCTTGTGATATAGCG 285
||||..|.|||||||||.|.|||||.||..|.||.||....||.||.||.
RBAM_029070__ 236 GGTCCCGTCTTGATAATATCTGGCAGGGAATACGCGCCAAAGACATCGCT 285
BSNT_04713___ 286 GAAAAAGCGGGTGTAAAAGAAGAAGCTGGCTACGTCATTTTACATGCTGA 335
||.||||||||.||..|..|||||||.||.|.|||||||.|.||.|||||
RBAM_029070__ 286 GAGAAAGCGGGCGTGCACAAAGAAGCGGGGTTCGTCATTCTGCACGCTGA 335
BSNT_04713___ 336 AGAGGGCTGGACGACCAATCTGCCGCTTGATGATTTCTTA-GC-GGAAAC 383
|||||||||||||.||||.|||||||||..||||| ||| || ||||||
RBAM_029070__ 336 AGAGGGCTGGACGGCCAACCTGCCGCTTTCTGATT--TTACGCGGGAAAC 383
BSNT_04713___ 384 TTCCCTTCTGGCTTATGCGCATAATGGCGAACCTTTAACCCCTGAACACG 433
.|||||.|||||.|||||||||||.|||||.||.|||||.||.||.||||
RBAM_029070__ 384 ATCCCTGCTGGCATATGCGCATAACGGCGAGCCGTTAACGCCAGAGCACG 433
BSNT_04713___ 434 GCTTTCCGCTGCGGGGTGTGTTTCCGCATCTATATTTTTGGAAAAGCGCC 483
|||.||||||..|.||.||.||.||.|||||.|||||||||||||||||.
RBAM_029070__ 434 GCTATCCGCTCAGAGGCGTTTTCCCCCATCTTTATTTTTGGAAAAGCGCA 483
BSNT_04713___ 484 AAGTGGCTGCGCGGCATCCAATTTACGAAAGAAAATCACCCTGGCTTTTG 533
||.||||||||||||||.||.||.||.||.|||||.|||||.||||||||
RBAM_029070__ 484 AAATGGCTGCGCGGCATTCAGTTCACAAAGGAAAACCACCCCGGCTTTTG 533
BSNT_04713___ 534 GGAGCGGAATGGCTATCACATGAGAGGCGACCCTTGGCAAAATCAAAGGT 583
||||...||.|||||.||.|||||.||.||.||.|||.|.|||.|..|.|
RBAM_029070__ 534 GGAGAAAAACGGCTACCATATGAGGGGAGATCCATGGAAGAATGAGCGCT 583
BSNT_04713___ 584 TTACATGGGATTAA 597
||||||||||||||
RBAM_029070__ 584 TTACATGGGATTAA 597
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