Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04780 and RBAM_029410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:19
# Commandline: needle
# -asequence dna-align/BSNT_04780___yutE.1.9828.seq
# -bsequence dna-align/RBAM_029410___yutE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04780___yutE-RBAM_029410___yutE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04780___yutE-RBAM_029410___yutE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04780___yutE
# 2: RBAM_029410___yutE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 449
# Identity: 316/449 (70.4%)
# Similarity: 316/449 (70.4%)
# Gaps: 28/449 ( 6.2%)
# Score: 1051.0
#
#
#=======================================
BSNT_04780___ 1 ATGTATTTTGTTGACAGAAGCAAAATCGAGAAAACACTAGGGTTCTTCGA 50
.||||||||||||||||||..||.|||||..|||||||..|.||.||.||
RBAM_029410__ 1 GTGTATTTTGTTGACAGAAATAATATCGAACAAACACTCCGTTTTTTTGA 50
BSNT_04780___ 51 GCACCAGCTGGCGCTATTTGACTCACAAACA-----GACTGGCAGTCTGA 95
|..||||||||||||.|||||| |.|| |..|||.||...||
RBAM_029410__ 51 GACCCAGCTGGCGCTGTTTGAC-----AGCACGCCTGCATGGGAGAGCGA 95
BSNT_04780___ 96 AATCGGGGAATTGGCACTTCAGCGTATAGGCCATCTGTTAATCGAATGCA 145
.||||...||..|||.|||.||||.||..|||||||..|.||||||||||
RBAM_029410__ 96 GATCGAAAAAAGGGCGCTTGAGCGGATCAGCCATCTTATGATCGAATGCA 145
BSNT_04780___ 146 TTTTGGATACAGGCAATGACATGATTGACGGCTTTATTATGCGGGACCCG 195
||.|.|||...||.|||||.|||||||||||||||||.|||||.||.|||
RBAM_029410__ 146 TTCTCGATGTCGGAAATGATATGATTGACGGCTTTATCATGCGCGATCCG 195
BSNT_04780___ 196 GGAAGCTATGACGACATTATGGATATACTTGTTGATGAGAAAGTTGTCAC 245
||.||.|||||||||||.||||||||.||....|||||.||.||.||..|
RBAM_029410__ 196 GGGAGTTATGACGACATCATGGATATTCTGACGGATGAAAAGGTGGTAGC 245
BSNT_04780___ 246 GGAAAAAGAGGGTGATGAGCTCAAGAAATTGATCGCCTACCGCAAAAC-G 294
.||..|.||.||..||.||||.|||.||.||||| .||.||..|||.| |
RBAM_029410__ 246 TGAGGATGAAGGGAATAAGCTGAAGCAACTGATC-TCTTCCAGAAAGCAG 294
BSNT_04780___ 295 TTGGTTCAACAGTATCTGCTCGCTGA-CAGCGGCGAGC--TTTACAGGCT 341
.|.||.||..|.||||.||.|||.|| ||.|.| |||| ||||| |||
RBAM_029410__ 295 CTTGTCCAGGAATATCAGCACGCCGATCATCAG-GAGCTGTTTAC--GCT 341
BSNT_04780___ 342 GATCAAGGCGCATCAAACA-----GCTCTTCAAGACTTCCCGAAACGGAT 386
||||| |.||||||| |..||..|||.|||.|||...||..|
RBAM_029410__ 342 GATCA-----CGTCAAACAAAGATGTGCTGAAAGCCTTTCCGGCCCGTGT 386
BSNT_04780___ 387 CAGAAGCTATTTGGAAACAGAGCTAGGACCTGTTTCCGCGTTTAAATAA 435
.||||.|||..||||||||||..||||.|||||||||||.|||||||||
RBAM_029410__ 387 AAGAACCTACCTGGAAACAGAATTAGGGCCTGTTTCCGCATTTAAATAA 435
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