Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04787 and RBAM_029450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:19
# Commandline: needle
# -asequence dna-align/BSNT_04787___yunB.1.9828.seq
# -bsequence dna-align/RBAM_029450___yunB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04787___yunB-RBAM_029450___yunB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04787___yunB-RBAM_029450___yunB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04787___yunB
# 2: RBAM_029450___yunB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 795
# Identity: 553/795 (69.6%)
# Similarity: 553/795 (69.6%)
# Gaps: 102/795 (12.8%)
# Score: 2078.5
#
#
#=======================================
BSNT_04787___ 1 ---------------------------------------TTGCCTTTCCG 11
||||||||.||
RBAM_029450__ 1 TTGCCTAGATACCGGAGCGCTCTTCGCAAGAGAGGGCCTTTGCCTTTTCG 50
BSNT_04787___ 12 TTACGTGATGCTCCTGTCCGTTGTCTTTTTTATCCTGTCAACAACGG--- 58
.||.|||.|.||.|||||..|||..|||||||||.| |.|.||||
RBAM_029450__ 51 ATATGTGCTTCTTCTGTCGTTTGCTTTTTTTATCAT---ATCGACGGTCA 97
BSNT_04787___ 59 TCAGCCTTTGGATGATCAATGGCTCGATCAAACCTGTTTTAATGGACATC 108
|||||||||||||||||||...|||.||||||||.||..|.|||.||||.
RBAM_029450__ 98 TCAGCCTTTGGATGATCAACTCCTCAATCAAACCGGTGCTGATGAACATA 147
BSNT_04787___ 109 GGCGAGATGGAAACGAAGCGTATAGCGACAGAGGTGATCCAGGATTCGAT 158
||.||.||||||||.||.||..|.|||||||||||.||...|||.||.||
RBAM_029450__ 148 GGAGAAATGGAAACCAAACGGGTGGCGACAGAGGTCATTACGGAATCCAT 197
BSNT_04787___ 159 TGAGGACTATATGTCTGACAGTGAAAATATGAAAGATATGTTTCAAATGA 208
|||.||.||.||||||.||||.||.|||.|||||||||||.|..|.||||
RBAM_029450__ 198 TGAAGAATACATGTCTCACAGCGACAATGTGAAAGATATGGTCGATATGA 247
BSNT_04787___ 209 ATTCTGATGAAAACGGAAACTTAACGACAATCGATTTTAATACACAGGTT 258
|..|.||||||||||||||..|.||.||.||.||||||||||||||..|.
RBAM_029450__ 248 AAACGGATGAAAACGGAAAAGTCACAACGATGGATTTTAATACACAAATG 297
BSNT_04787___ 259 GTAAACAGTGTGAAAACAAAAGTGACAAAGCAGCTTCAGGCTCATTTGAA 308
||.||||||.||||..|.|||||||||||||||||||||||||||.||||
RBAM_029450__ 298 GTCAACAGTATGAAGGCGAAAGTGACAAAGCAGCTTCAGGCTCATCTGAA 347
BSNT_04787___ 309 AGAGATGGA----AAC--------CCAT--ACCGGACACAGCGGCGCCAG 344
.||...||| ||| .||| |.||||.|.| |||||
RBAM_029450__ 348 GGAAGCGGAGTTGAACAATAAGCAGCATGAAACGGAAAAA--GGCGC--- 392
BSNT_04787___ 345 TGAAAAC----------ATTATGATCAACATTCCGCTGGGACAGGTAACC 384
|||||| |||||||||.|.|||||..|.||.|||||.||.
RBAM_029450__ 393 -GAAAACGGCCGATGAAATTATGATCGATATTCCCTTAGGGCAGGTCACG 441
BSNT_04787___ 385 GGCAACAGCCTTCTTGGAAACCTCGGGCCGAAAATCCCGGTCCGGTTCAA 434
||.||||||.||||.|||||.||.||||||||||||||.||.||.||.||
RBAM_029450__ 442 GGAAACAGCATTCTCGGAAATCTGGGGCCGAAAATCCCCGTGCGCTTTAA 491
BSNT_04787___ 435 TTTAATCGGTGACGCTTTTACAGATGTCAAAACCAAAATCAAGCCGTATG 484
..|.||||||||.||.||.||.|||||.|||||.|||||.||||||||.|
RBAM_029450__ 492 CCTGATCGGTGATGCGTTAACTGATGTGAAAACAAAAATAAAGCCGTACG 541
BSNT_04787___ 485 GCATAAATAACGCACTTATTGATATCAGCATCTTTGTCGAAATTAAAGTG 534
||||.||.||.||.||.||.||||||||.||.|||||.|||||.||||||
RBAM_029450__ 542 GCATTAACAATGCCCTGATCGATATCAGTATTTTTGTGGAAATAAAAGTG 591
BSNT_04787___ 535 AAGGTCATCATTCCATTTGCCAGCAAAACCGCTGTCGTCACAAATAATGT 584
||||||||.|||||.||||||||.||.||..|.|||||.|||||||||.|
RBAM_029450__ 592 AAGGTCATTATTCCGTTTGCCAGTAAGACATCAGTCGTGACAAATAATAT 641
BSNT_04787___ 585 TCCTGTATCGATTAAAGCAGTGCAGGGCGAAGTGCCGCAGTTTTATAATG 634
|||.||.||.||||||||..|.||.||.||.|||||||||||||||||.|
RBAM_029450__ 642 TCCGGTCTCCATTAAAGCGATTCAAGGAGAGGTGCCGCAGTTTTATAACG 691
BSNT_04787___ 635 GAAGCGGCGGCTCGGGTGTCACGCCTTCTGTCCAGCTCCCGAGCAGCAAA 684
||||||||||.||.|||||.||||||||.||||||||.|||||
RBAM_029450__ 692 GAAGCGGCGGGTCAGGTGTGACGCCTTCCGTCCAGCTGCCGAG------- 734
BSNT_04787___ 685 GAAGAAGACGGTGCTGATTCAAAAAAAGAAAAAAGCAGCAAATAA 729
|.|||||.||||.|||| ..||||||
RBAM_029450__ 735 ------------------TGAAAAACAGAAGAAAG--ATAAATAA 759
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