Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04832 and RBAM_029670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:22
# Commandline: needle
# -asequence dna-align/BSNT_04832___yurP.1.9828.seq
# -bsequence dna-align/RBAM_029670___yurP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04832___yurP-RBAM_029670___yurP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04832___yurP-RBAM_029670___yurP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04832___yurP
# 2: RBAM_029670___yurP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 994
# Identity: 789/994 (79.4%)
# Similarity: 789/994 (79.4%)
# Gaps: 14/994 ( 1.4%)
# Score: 3107.5
#
#
#=======================================
BSNT_04832___ 1 TTGAGTCAGGCCACAGCAAAAGTAAATCGTGAGGTTCAAGCTTTCTTGCA 50
||||||||..|..|.|||.||||.||||...|||||||.|||||||||.|
RBAM_029670__ 1 TTGAGTCAAACTGCCGCACAAGTGAATCACAAGGTTCAGGCTTTCTTGGA 50
BSNT_04832___ 51 GGATTTGAAAGGGAAAACCATTGATCATGTATTCTTTGTCGCATGCGGAG 100
.|||.|||||||.|||||.|||||.||.||.||.||.|||||.|||||.|
RBAM_029670__ 51 TGATCTGAAAGGAAAAACGATTGACCACGTCTTTTTCGTCGCTTGCGGGG 100
BSNT_04832___ 101 GGTCTTCTGCCATTATGTATCCGAGTAAGTATGTGTTTGACAGAGAGTCA 150
|.|||||.|||||||||||||||||.|||||.|||||||||||||||.|.
RBAM_029670__ 101 GTTCTTCAGCCATTATGTATCCGAGCAAGTACGTGTTTGACAGAGAGGCG 150
BSNT_04832___ 151 AAATCAATAAACTCCGACCTCTACAGCGCCAACGAATTTATTCAGCGCAA 200
|||.|.||.|.|||.||.||||||||..|.||.|||||||||||||||||
RBAM_029670__ 151 AAAGCCATCAGCTCTGATCTCTACAGTTCAAATGAATTTATTCAGCGCAA 200
BSNT_04832___ 201 CCCTGTTCAGCTTGGTGAAAAGTCTCTTGTTATTTTGTGCTCGCATTCGG 250
.||.||||||||.||.||.||.|||||.||.|||||.||.||.||.||.|
RBAM_029670__ 201 TCCCGTTCAGCTCGGAGAGAACTCTCTCGTGATTTTATGTTCTCAGTCAG 250
BSNT_04832___ 251 GAAATACCCCGGAGACAGTCAAAGCTGCTGCGTTT-GCAAGGGGAAAGGG 299
|.|||||.|||||.||.||.|||||.||.| |||| ||.||...|||.||
RBAM_029670__ 251 GCAATACGCCGGAAACGGTGAAAGCCGCCG-GTTTCGCCAGAAAAAAAGG 299
BSNT_04832___ 300 TGCACTTACGATTGCGATGACGTTTAAACCGGAGTCTCCTTTAGCGCAGG 349
.||.|||||||||||||||||.|||.|.||.||.||.||.||||||.|.|
RBAM_029670__ 300 CGCGCTTACGATTGCGATGACCTTTGAGCCTGATTCGCCGTTAGCGAAAG 349
BSNT_04832___ 350 AAGCGCAATATGTTGCCCAGTACGATTGGGGTGATGAGGCGCTTGCGATC 399
||||..|||||||.||...|||.||.||||||||..|.||.|..|||||.
RBAM_029670__ 350 AAGCCGAATATGTCGCGGTGTATGACTGGGGTGAGAACGCACAGGCGATA 399
BSNT_04832___ 400 AATACAAACTATGGCGTTTTGTATCAAATCGTTTTTGGCACCCTGCAAGT 449
||||..||.||.||.|||.|||||||||||||.||.|||.|..|.||.||
RBAM_029670__ 400 AATATGAATTACGGGGTTCTGTATCAAATCGTGTTCGGCGCTTTACACGT 449
BSNT_04832___ 450 ATTAGAAAACAATACGAAATTTGAGCAGGCAATTGAAGGCTTAGAC-CAA 498
..|.||||||.||.|....|||||.|||||.||.||.| ||| |||
RBAM_029670__ 450 GCTGGAAAACCATCCCGTGTTTGAACAGGCGATCGACG-----GACTCAA 494
BSNT_04832___ 499 T----TGCAGGCTGTATATGAAAAAGCCCTTAAGCAGGAAGCTGACAACG 544
| |.|||.|.||||||||.|||||.||.||.||.|||||.||..|||
RBAM_029670__ 495 TAAGCTCCAGACCGTATATGACAAAGCGCTCAAACAAGAAGCGGATCACG 544
BSNT_04832___ 545 CCAAGCAATTTGCAAAAGCCCATGAAAAAGAAAGTATTATTTATACCATG 594
|.|||..|||.||.||||||||.|||||||||..|||.|||||.||.|||
RBAM_029670__ 545 CAAAGGCATTCGCGAAAGCCCACGAAAAAGAAGATATCATTTACACGATG 594
BSNT_04832___ 595 GCAAGCGGTGCAAACTACGGTGTCGCTTACTCCTACAGCATCTGCATTCT 644
|||||||||||.||||||||.|||||||||||||||||||||||||||||
RBAM_029670__ 595 GCAAGCGGTGCGAACTACGGCGTCGCTTACTCCTACAGCATCTGCATTCT 644
BSNT_04832___ 645 CATGGAAATGCAATGGATTCATTCCCACGCCATTCATGCCGGAGAATATT 694
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029670__ 645 CATGGAAATGCAATGGATTCATTCCCACGCCATTCATGCCGGAGAATATT 694
BSNT_04832___ 695 TTCACGGACCGTTTGAAATTATTGATGAATCCGTGCCGTTTATCATCCTG 744
|||||||||||||.|||||.||||||||||||||.||.|||||.||||||
RBAM_029670__ 695 TTCACGGACCGTTCGAAATCATTGATGAATCCGTTCCATTTATTATCCTG 744
BSNT_04832___ 745 CTCGGTTTAGATGAAACAAGACCTCTTGAAGAGCGGGCGCTTACCTTCTC 794
|||||.|||||.|||||||||||.||||||||||||||||||.|||||||
RBAM_029670__ 745 CTCGGCTTAGACGAAACAAGACCCCTTGAAGAGCGGGCGCTTTCCTTCTC 794
BSNT_04832___ 795 GAAAAAG-TATGGCAAAAAGCTCACTGTGCTTGATGCTGCATCTTACGAC 843
|||||| ||.||||||||.||.||||||||||||||.|||.|.||.||.
RBAM_029670__ 795 -AAAAAGATACGGCAAAAAACTGACTGTGCTTGATGCGGCAGCATATGAT 843
BSNT_04832___ 844 TTCACTGCAATTGACGATTCAGTTAAAGGCTATCTTTCTCCGCTCGTTCT 893
||..|.|.||||||||||||.||.|||||||||||..||||.|||||..|
RBAM_029670__ 844 TTTTCCGGAATTGACGATTCTGTAAAAGGCTATCTGGCTCCTCTCGTATT 893
BSNT_04832___ 894 CAATCGTGTGCTGAGAAGCTATGCAGACGAGCTGGCAGAGGCGAGAAATC 943
.||.||.|||||.|||||||||||.||.|.||||||.||.||.||.||.|
RBAM_029670__ 894 AAACCGGGTGCTCAGAAGCTATGCGGATGCGCTGGCGGAAGCAAGGAACC 943
BSNT_04832___ 944 ATCCTTTATCCCATAGAAGATACATGTGGAAAGTTGAGTATTGA 987
||||.|||..|||..|..|.||||||||||||||.||.||||.|
RBAM_029670__ 944 ATCCGTTAAGCCAGCGGCGTTACATGTGGAAAGTCGAATATTAA 987
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