Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02915 and RBAM_029730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_02915.1.9828.seq
# -bsequence dna-align/RBAM_029730___yncE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02915-RBAM_029730___yncE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02915-RBAM_029730___yncE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02915
# 2: RBAM_029730___yncE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 476
# Identity: 137/476 (28.8%)
# Similarity: 137/476 (28.8%)
# Gaps: 283/476 (59.5%)
# Score: 342.5
#
#
#=======================================
BSNT_02915 0 -------------------------------------------------- 0
RBAM_029730__ 1 ATGAAACGCGGCATTACTTTTGACATCCCAAATGAATTCGGGCGGTTTGC 50
BSNT_02915 0 -------------------------------------------------- 0
RBAM_029730__ 51 GGCAGATATATTACAACCGTTCCCCATCTCTTCCTATACGTGGTTTATCG 100
BSNT_02915 0 -------------------------------------------------- 0
RBAM_029730__ 101 GTGATGGAGAGGCGTATACGGAATTCAAAGAAGGCATCGATACAGACCTG 150
BSNT_02915 0 -------------------------------------------------- 0
RBAM_029730__ 151 TTTTCGCAAAATCAACGCATCATTCAGGGTCAAGAACTCCGTCAGCGTCT 200
BSNT_02915 0 -------------------------------------------------- 0
RBAM_029730__ 201 GGAAGGATACCCTTATTATATGATTTTTGCTGAATTGAAAGCTTTCCCGG 250
BSNT_02915 1 -----ATGGTTAATCAAGTCAATACATATGAAGAG--TTTGCTGACAGTG 43
|||||.|...||.|||||||.||.||.||| |||| ||.|||.
RBAM_029730__ 251 GCGGGATGGTAACGGAAATCAATACGTACGAGGAGTATTTG--GAGAGTT 298
BSNT_02915 44 ATTGCGAACTTGTCCTGTTGATAGCAGATAATAGCTACGTTT----CGAT 89
..||.||||||||.||..|.||.|||| ||.||| |||.| ||.|
RBAM_029730__ 299 CCTGTGAACTTGTGCTTCTCATTGCAG---ATTGCT-CGTATGTAACGTT 344
BSNT_02915 90 TTACTGTAAAAAC----AAAAAATTCATTGAAAAACTTTACTTCA--ATG 133
.||.||.|||.|| |.| |..|.|||...|||| |||| |.|
RBAM_029730__ 345 ATATTGCAAAGACCCTGACA----TGCTCGAAGCCCTTT--TTCAGCAGG 388
BSNT_02915 134 CTTTACAGAAT--GATTTTGAAGACGTTCAATTTATCACTGATGAAAATG 181
||.||| ||| |..|||.|...||||.|.|.|.|.||.|||||.||||
RBAM_029730__ 389 CTGTAC--AATGCGGGTTTCACCGCGTTGACTATGTTACAGATGAGAATG 436
BSNT_02915 182 ACACAAGAACAAGCCTTACTGTATGA 207
||.|.|||||..|..|..||||.|||
RBAM_029730__ 437 ACGCGAGAACGGGATTGTCTGTCTGA 462
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