Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04842 and RBAM_029760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:22
# Commandline: needle
# -asequence dna-align/BSNT_04842___yurV.1.9828.seq
# -bsequence dna-align/RBAM_029760___yurV.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04842___yurV-RBAM_029760___yurV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04842___yurV-RBAM_029760___yurV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04842___yurV
# 2: RBAM_029760___yurV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 448
# Identity: 397/448 (88.6%)
# Similarity: 397/448 (88.6%)
# Gaps: 8/448 ( 1.8%)
# Score: 1790.0
#
#
#=======================================
BSNT_04842___ 1 ATGTCTTTTAATGCAAACTTAGATACATTGTACAGACAGGTGATTATGGA 50
|||||||||||||||||.|||||||||||.||||||||.|||||.|||||
RBAM_029760__ 1 ATGTCTTTTAATGCAAATTTAGATACATTATACAGACAAGTGATCATGGA 50
BSNT_04842___ 51 TCATTACAAAAACCCGCGAAATAAAGGGGTTTTGAATGACAGCATTGTCG 100
||||||||||||.|||||.||.||||||||||||.||||||||||.||||
RBAM_029760__ 51 TCATTACAAAAATCCGCGCAACAAAGGGGTTTTGGATGACAGCATCGTCG 100
BSNT_04842___ 101 TGGATATGAACAATCCGACATGCGGCGACCGCATCAGACTGACAATGAAG 150
|.|||||||||||.|||||.|||||||||||.||||||||||||||||||
RBAM_029760__ 101 TCGATATGAACAACCCGACTTGCGGCGACCGGATCAGACTGACAATGAAG 150
BSNT_04842___ 151 CTTGACGGAGACATCGTGGAAGATGCGAAGTTTGAAGGGGAAGGCTGTTC 200
||||||||.||.|.|||..|.||.||||||||||||||||||||||||||
RBAM_029760__ 151 CTTGACGGCGATACCGTTCAGGAAGCGAAGTTTGAAGGGGAAGGCTGTTC 200
BSNT_04842___ 201 CATTTCAATGGCATCCGCTTCGATGATGACTCAGGCCATTAAAGGGAAAG 250
.||.||.|||||.||.|||||.||||||||.|||||.||||||||.||||
RBAM_029760__ 201 TATCTCCATGGCTTCAGCTTCCATGATGACGCAGGCGATTAAAGGAAAAG 250
BSNT_04842___ 251 ATATTGAAACTGCCCTTTCCATGTCTAAGATTTTCTCGGATATGATGCAA 300
|||||||.||.||||||||||||||||||||||||||.||.|||||||||
RBAM_029760__ 251 ATATTGATACCGCCCTTTCCATGTCTAAGATTTTCTCAGACATGATGCAA 300
BSNT_04842___ 301 GGGAAAGAGTATGATGATTCTATAGATCTCGGGGATATTGAAGCCCTTCA 350
||||||||||||||.||.||.|||||||||||||||||||||||.|||||
RBAM_029760__ 301 GGGAAAGAGTATGACGACTCGATAGATCTCGGGGATATTGAAGCTCTTCA 350
BSNT_04842___ 351 AGGCGTTTCAAAATTCCCGGCCCGTATCAAATGTGCAACCCTGTCTTGGA 400
|||||||||.||||||||||||||.||.||||||||.|||||.||.||||
RBAM_029760__ 351 AGGCGTTTCGAAATTCCCGGCCCGGATTAAATGTGCCACCCTTTCATGGA 400
BSNT_04842___ 401 AAGCACTTGAAAAAGGAGTC----GCGAAACAAGAAGGCGGCAATTAA 444
|||||||||||||||||||| |||||| ||||||||||||||
RBAM_029760__ 401 AAGCACTTGAAAAAGGAGTCGCTGGCGAAA----AAGGCGGCAATTAA 444
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