Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04844 and RBAM_029780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:23
# Commandline: needle
# -asequence dna-align/BSNT_04844___yurX.1.9828.seq
# -bsequence dna-align/RBAM_029780___yurX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04844___yurX-RBAM_029780___yurX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04844___yurX-RBAM_029780___yurX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04844___yurX
# 2: RBAM_029780___yurX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1315
# Identity: 1126/1315 (85.6%)
# Similarity: 1126/1315 (85.6%)
# Gaps: 2/1315 ( 0.2%)
# Score: 4862.0
#
#
#=======================================
BSNT_04844___ 1 ATGACACTAGGTACAAAACTATCCGTAGATCAGGAGTATCTCAAAAGCTT 50
||||||.|.|..||.||||||||||||||||||||.|||.|||||.||||
RBAM_029780__ 1 ATGACATTGGAAACGAAACTATCCGTAGATCAGGAATATGTCAAAGGCTT 50
BSNT_04844___ 51 TTCCGAAAAGCACCAAGAACCTGCCTGGCTGAAGAACCTGCGCTTACAGG 100
|||.||||||||.||||||||||||||||||||.||||||||||||||||
RBAM_029780__ 51 TTCTGAAAAGCATCAAGAACCTGCCTGGCTGAAAAACCTGCGCTTACAGG 100
BSNT_04844___ 101 CTCTTGAACAAGCTGAGGATCTGCCGATGCCAAAACCTGACAAAACAAAA 150
||||||||.|||||||.|||||||||.||||.||.|||||.|||||||||
RBAM_029780__ 101 CTCTTGAAAAAGCTGAAGATCTGCCGCTGCCTAAGCCTGATAAAACAAAA 150
BSNT_04844___ 151 ATCACAAACTGGAACTTCACGAATTTCGCGAAGCATACAGTGGATAACGA 200
||||||||.||||||||.||.||.|||...|||||||||||.||.||.|.
RBAM_029780__ 151 ATCACAAATTGGAACTTTACAAAGTTCAACAAGCATACAGTAGAAAATGC 200
BSNT_04844___ 201 ACCGCTTTCTTCATTAGAAGATTTGACTGATGAAGTAAAAGCGCTGATCG 250
.||||||.||||.|||||||||||..|||||||||.||||||||||||||
RBAM_029780__ 201 GCCGCTTGCTTCTTTAGAAGATTTAGCTGATGAAGCAAAAGCGCTGATCG 250
BSNT_04844___ 251 ACGTTGAAAACGAAGATAAAACATTATACGTACAGCGTGACCAGACGCCG 300
|..|.|||||||||||.|||||.||||||||.|||||||||||.|||||.
RBAM_029780__ 251 ATATCGAAAACGAAGACAAAACGTTATACGTGCAGCGTGACCAAACGCCC 300
BSNT_04844___ 301 GCATATCTTTCTCTTTCTCAAGAATTGAAAGACAAAGGCGTCATCTTCAC 350
||.|..||.||||||||..|||||.||||||||||||||||||||||.||
RBAM_029780__ 301 GCTTTCCTATCTCTTTCCAAAGAACTGAAAGACAAAGGCGTCATCTTTAC 350
BSNT_04844___ 351 TGATATTCTGACTGCTGCACGCGAGCACAGCGACTTGGTGGAGAAATACT 400
.||.||..|.||.|||||.||.||||||||||||.|.||.|||||.||.|
RBAM_029780__ 351 GGACATCTTAACGGCTGCCCGTGAGCACAGCGACCTCGTTGAGAAGTATT 400
BSNT_04844___ 401 TTATGAAGGACGGCGTGAAGGTTGACGAACATAAGTTAACTGCACTTCAC 450
|.|||||.||||||||.|||||.|||||||||||..|.|||||.|||||.
RBAM_029780__ 401 TCATGAAAGACGGCGTTAAGGTCGACGAACATAAACTGACTGCGCTTCAT 450
BSNT_04844___ 451 GCGGCTCTTGTTAACGGAGGAGCATTCCTTTATGTTCCGAAAAATGTTCA 500
||.||..|..|.|||||.||.|||||||||||||||||.|||||.|||||
RBAM_029780__ 451 GCAGCATTAATGAACGGCGGGGCATTCCTTTATGTTCCTAAAAACGTTCA 500
BSNT_04844___ 501 GGTGGAGACGCCGGTTCAGGCTGTTTATGTCCACGAAAGCAATGATACAG 550
||||||||||||.||||||||.|||||.||.||.|||||||||||.||.|
RBAM_029780__ 501 GGTGGAGACGCCTGTTCAGGCCGTTTACGTTCATGAAAGCAATGACACGG 550
BSNT_04844___ 551 CTCTATTCAACCACGTGCTGATTGTGGCTGAAGACCACAGCTCTGTCACA 600
|..|.|||||||||||||||||.||.|||||||||||||||||.||.||.
RBAM_029780__ 551 CATTGTTCAACCACGTGCTGATCGTCGCTGAAGACCACAGCTCCGTGACT 600
BSNT_04844___ 601 TATGTAGAAAACTACATCAGCACTGTAAACCCGAAAGACGCTGTCTTCAA 650
||.||.||.||||||||||||||.||.||.||||||||.|||||.|||||
RBAM_029780__ 601 TACGTTGAGAACTACATCAGCACGGTGAATCCGAAAGAAGCTGTATTCAA 650
BSNT_04844___ 651 TATTATCAGTGAGGTCATCACAGGTGATAATGCCAGCGTGACATACGGTG 700
.|||||||||||.||..|||||||||||||||||||||||||.|||||.|
RBAM_029780__ 651 CATTATCAGTGAAGTGGTCACAGGTGATAATGCCAGCGTGACGTACGGCG 700
BSNT_04844___ 701 CGGTGGATAATCTGTCAAGC-GGTGTGACAACTTATGTGAACCGCCGCGG 749
|.||.||.||.||||| ||| ||.||.|||||.||.||.|||||||||||
RBAM_029780__ 701 CCGTTGACAACCTGTC-AGCAGGCGTCACAACATACGTCAACCGCCGCGG 749
BSNT_04844___ 750 TGCTGCGCGCGGACGCGACAGCAAAATCGAGTGGGCTCTTGGCCTGATGA 799
.||.|||||||||||||||||||.||||||||||||.||.||.|||||||
RBAM_029780__ 750 AGCCGCGCGCGGACGCGACAGCAGAATCGAGTGGGCGCTCGGACTGATGA 799
BSNT_04844___ 800 ACGACGGCGACACGATTTCCGAAAATACAACAAACCTTTACGGTGACGGC 849
|||||||||||||||||||.|||||.||.||||||||.|||||.||||||
RBAM_029780__ 800 ACGACGGCGACACGATTTCTGAAAACACGACAAACCTCTACGGAGACGGC 849
BSNT_04844___ 850 ACATACGGTGATACGAAAACGGTTGTTGTCGGAAGAGGAGAGCAAACAGA 899
||||||||.|||||||||||.||.|||||||||||||||||.||.||.||
RBAM_029780__ 850 ACATACGGCGATACGAAAACCGTAGTTGTCGGAAGAGGAGAACAGACGGA 899
BSNT_04844___ 900 AAACTTCACAACACAAATCATCCATTTCGGTAAAGCTTCTGAAGGCTATA 949
||||||.||.||.||.||||||||.||||||||.||||||||||||||||
RBAM_029780__ 900 AAACTTTACGACGCAGATCATCCACTTCGGTAAGGCTTCTGAAGGCTATA 949
BSNT_04844___ 950 TCTTGAAGCACGGTGTGATGAAGGATTCCGCTTCTTCTATCTTTAACGGA 999
||.||||||||||.||.|||||.|||.||||.|||||.||||||||||||
RBAM_029780__ 950 TCCTGAAGCACGGAGTCATGAAAGATGCCGCATCTTCCATCTTTAACGGA 999
BSNT_04844___ 1000 ATCGGCAAAATCGAACATGGCGCTTCTAAAGCGAATGCGGAGCAAGAATC 1049
||||||||||||||.||.|||||.||.|||||.||.||.||.||.|||||
RBAM_029780__ 1000 ATCGGCAAAATCGAGCACGGCGCGTCGAAAGCAAACGCTGAACAGGAATC 1049
BSNT_04844___ 1050 ACGCGTGCTGATGCTTAGCGAAAAAGCACGCGGAGACGCAAACCCTATTC 1099
.|||||.||||||||.||.|||||||||||||||||.||||||||.||||
RBAM_029780__ 1050 CCGCGTTCTGATGCTGAGTGAAAAAGCACGCGGAGATGCAAACCCGATTC 1099
BSNT_04844___ 1100 TTTTAATTGACGAAGACGATGTAACTGCAGGACATGCGGCATCTGTCGGC 1149
||||||||||.|||||||||||||||||||||||||||||||||||||||
RBAM_029780__ 1100 TTTTAATTGATGAAGACGATGTAACTGCAGGACATGCGGCATCTGTCGGC 1149
BSNT_04844___ 1150 CGTGTGGACCCTATTCAGCTTTACTACCTGATGAGCCGCGGGATTCCGAA 1199
|||||||||||.||.||||||||||||.|.|||||||||||.||||||||
RBAM_029780__ 1150 CGTGTGGACCCGATCCAGCTTTACTACTTAATGAGCCGCGGAATTCCGAA 1199
BSNT_04844___ 1200 AGAAGAAGCAGAACGCTTAGTCATTTACGGATTCCTTGCACCGGTAGTAA 1249
|||||||||.||.|||||||||||.||||||||||||||.|||||.||||
RBAM_029780__ 1200 AGAAGAAGCGGAGCGCTTAGTCATCTACGGATTCCTTGCTCCGGTGGTAA 1249
BSNT_04844___ 1250 ATGAACTTCCGATTGAAGGCGTTAAGAAACAATTAGTTTCTGTTATCGAA 1299
|.||.||||||||||||||.|||||||||||..|.||.||.||.||||||
RBAM_029780__ 1250 AAGAGCTTCCGATTGAAGGAGTTAAGAAACAGCTCGTCTCCGTCATCGAA 1299
BSNT_04844___ 1300 AGGAAAGTGAAGTAA 1314
||||||||.||.|||
RBAM_029780__ 1300 AGGAAAGTAAAATAA 1314
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