Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04854 and RBAM_029820

See Amino acid alignment / Visit BSNT_04854 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence dna-align/BSNT_04854___yusB.1.9828.seq
#    -bsequence dna-align/RBAM_029820___yusB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04854___yusB-RBAM_029820___yusB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04854___yusB-RBAM_029820___yusB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04854___yusB
# 2: RBAM_029820___yusB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 670
# Identity:     532/670 (79.4%)
# Similarity:   532/670 (79.4%)
# Gaps:           2/670 ( 0.3%)
# Score: 2096.0
# 
#
#=======================================

BSNT_04854___      1 ATGTTTGAAAAATACTTCCCGAACGTTGATTTAACTGAATTATGGAACGC     50
                     |||||||||||||..|||||||||||||||.||||.||..|.||||..||
RBAM_029820__      1 ATGTTTGAAAAATGGTTCCCGAACGTTGATATAACCGAGCTGTGGACGGC     50

BSNT_04854___     51 GACATATGAAACACTTTATATGACGCTGATTTCTTTACTGTTTGCTTTTG    100
                     .|||||.||.||.||||||||||||.|.||..|.|||.|.|||.|.||||
RBAM_029820__     51 CACATACGAGACCCTTTATATGACGGTCATCGCATTAGTTTTTTCATTTG    100

BSNT_04854___    101 TCATCGGGGTCATCCTCGG-CTTGCTGCTCTTTCTGACGAGCAAAGGAAG    149
                     |||||||.|..||.||||| ||| |||||||||.|.|||.||||.|||||
RBAM_029820__    101 TCATCGGAGCGATTCTCGGTCTT-CTGCTCTTTTTAACGGGCAAGGGAAG    149

BSNT_04854___    150 CCTCTGGCAGAATAAAGCGGTCAACTCTGTGATTGCGGCCGTTGTTAACA    199
                     |.|.|||.|.||||||....|.|||.|.|||||||||||.||.|||||.|
RBAM_029820__    150 CTTATGGGAAAATAAAATCATTAACACCGTGATTGCGGCGGTCGTTAATA    199

BSNT_04854___    200 TATTCAGATCGATTCCGTTCCTTATTTTAATTATTTTACTATTAGGTTTT    249
                     |.|||||.||.||||||||.|||||||||||||||.|.||..|.||.|||
RBAM_029820__    200 TTTTCAGGTCTATTCCGTTTCTTATTTTAATTATTCTGCTTCTCGGCTTT    249

BSNT_04854___    250 ACGAAATTTTTAGTCGGCACGATCTTAGGGCCAAACGCCGCTTTGCCGGC    299
                     ||.||..||||.|||||..||||.|||||.||.||||||||.||||||||
RBAM_029820__    250 ACTAAGATTTTGGTCGGATCGATTTTAGGACCGAACGCCGCATTGCCGGC    299

BSNT_04854___    300 GCTGGTAATCGGCTCGGCACCATTTTACGCGCGCCTTGTTGAAATCGCGC    349
                     ||||.|.||||||||.||.||.||||||||.||.||||..|||||.||||
RBAM_029820__    300 GCTGATTATCGGCTCCGCGCCGTTTTACGCCCGTCTTGCGGAAATTGCGC    349

BSNT_04854___    350 TGCGTGAGGTGGATAAAGGTGTGATTGAAGCCGCTAAATCAATGGGCGCG    399
                     |.||.||.||.||||||||.||.||.|||||.||.|.|||||||||.||.
RBAM_029820__    350 TCCGGGAAGTCGATAAAGGAGTCATCGAAGCTGCCAGATCAATGGGAGCA    399

BSNT_04854___    400 AAAACGTCTACGATTATTTTCAAAGTGTTGATTCCGGAATCAATGCCTGC    449
                     ||.||.||.||||||||.|||||||||.|||||||.||||||||||||||
RBAM_029820__    400 AAGACATCGACGATTATCTTCAAAGTGCTGATTCCTGAATCAATGCCTGC    449

BSNT_04854___    450 TCTTATTTCTGGCATTACGGTTACTGCCATCGCTTTGATCGGCTCAACGG    499
                     |.|.|||||.|||||.||.|||||.||||||||..|||||||.||.||.|
RBAM_029820__    450 TTTAATTTCAGGCATCACCGTTACAGCCATCGCCCTGATCGGATCTACCG    499

BSNT_04854___    500 CAATTGCCGGAGCCATTGGTTCAGGAGGCCTTGGAAACCTTGCGTACGTA    549
                     |.||||||||.|||||.||||||||.||.||.|||||||||||.||.|||
RBAM_029820__    500 CCATTGCCGGCGCCATCGGTTCAGGCGGACTCGGAAACCTTGCATATGTA    549

BSNT_04854___    550 GAAGGATATCAGTCTAATAACGCTGATGTTACCTTCGTTGCTACTGTGTT    599
                     |||||.||.|||||.|||||..|.|||||.||.||.||.||.||.||.||
RBAM_029820__    550 GAAGGCTACCAGTCCAATAATACGGATGTAACGTTTGTAGCGACAGTATT    599

BSNT_04854___    600 TATTTTAATCATCGTGTTTATTATTCAAATCATCGGTGATCTAATAACAA    649
                     |||..|.||||||||.|||||.|||||.||.|||||||||.|.||.||||
RBAM_029820__    600 TATACTCATCATCGTCTTTATCATTCAGATTATCGGTGATGTGATTACAA    649

BSNT_04854___    650 ATATTATAGACAAACGATAA    669
                     ||||.|||||||||.|||||
RBAM_029820__    650 ATATAATAGACAAAAGATAA    669


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