Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04863 and RBAM_029890

See Amino acid alignment / Visit BSNT_04863 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:24
# Commandline: needle
#    -asequence dna-align/BSNT_04863___yusI.1.9828.seq
#    -bsequence dna-align/RBAM_029890___yusI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04863___yusI-RBAM_029890___yusI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04863___yusI-RBAM_029890___yusI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04863___yusI
# 2: RBAM_029890___yusI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity:     297/357 (83.2%)
# Similarity:   297/357 (83.2%)
# Gaps:           0/357 ( 0.0%)
# Score: 1245.0
# 
#
#=======================================

BSNT_04863___      1 ATGTCGTTAACTTTTTACTGGTACCCTAAATGCGGAACGTGCCGCAAAGC     50
                     ||||||||||.|||||||||||||||||||||||||||||||||.||.||
RBAM_029890__      1 ATGTCGTTAAATTTTTACTGGTACCCTAAATGCGGAACGTGCCGTAATGC     50

BSNT_04863___     51 AAAGAAGTGGCTTGAAGAGCATGGGAAAGAAATAAACGAAATACATATTG    100
                     .||.||.|||||.|||||.|..||.||.||||||||||||||||||||.|
RBAM_029890__     51 GAAAAAATGGCTGGAAGACCGCGGTAAGGAAATAAACGAAATACATATCG    100

BSNT_04863___    101 CTGAGCAGCCGCCAAGCAAAGAAGAATTAAAAGCGCTTTATGAAAAAAGC    150
                     |.|||.|..|.||....|||||||||.|.||||..|||||||||||.|||
RBAM_029890__    101 CGGAGGAAACTCCGTCGAAAGAAGAAATTAAAGACCTTTATGAAAAGAGC    150

BSNT_04863___    151 GGGCTGGATCTCAAGAAATTTTTCAACACGAGCGGCATGAAATACCGCGA    200
                     ||.||.||.|||||.||.|||||||||||||||||.||||||||||||||
RBAM_029890__    151 GGTCTTGAGCTCAAAAAGTTTTTCAACACGAGCGGAATGAAATACCGCGA    200

BSNT_04863___    201 GCTCAATCTCAAGGAAAAGCTGTATCACATGTCAGAGGACGAACAGCTCG    250
                     |||.||..|.||||||||.|||||.||||||||||||||.||||||||.|
RBAM_029890__    201 GCTGAACTTAAAGGAAAAACTGTACCACATGTCAGAGGATGAACAGCTTG    250

BSNT_04863___    251 AGCTGCTGGCTTCAGATGGTATGCTGATCAAACGCCCGCTTACAACAGAC    300
                     |.||.|||||.|||||.||||||||..|.|||||||||.||||.||||||
RBAM_029890__    251 AACTCCTGGCATCAGACGGTATGCTCCTGAAACGCCCGATTACGACAGAC    300

BSNT_04863___    301 GGTGAAAAAGTGACTGTCGGATTTAAAGAAGACCAATTTGAAGAAAACTG    350
                     ||.||||||||.||||||||.|||||||||||||||||.|||.||.|.||
RBAM_029890__    301 GGCGAAAAAGTCACTGTCGGCTTTAAAGAAGACCAATTCGAAAAATATTG    350

BSNT_04863___    351 GGCTTAA    357
                     |...|||
RBAM_029890__    351 GATGTAA    357


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