Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04909 and RBAM_030100

See Amino acid alignment / Visit BSNT_04909 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:26
# Commandline: needle
#    -asequence dna-align/BSNT_04909___mrgA.1.9828.seq
#    -bsequence dna-align/RBAM_030100___mrgA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04909___mrgA-RBAM_030100___mrgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04909___mrgA-RBAM_030100___mrgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04909___mrgA
# 2: RBAM_030100___mrgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity:     354/477 (74.2%)
# Similarity:   354/477 (74.2%)
# Gaps:          21/477 ( 4.4%)
# Score: 1327.5
# 
#
#=======================================

BSNT_04909___      1 ------ATGAAAACTGAAAACGCAAAAACAAATCAAACATTAGTTGAGAA     44
                           |||||.||..|||||||.||||.||.|.||||..|.||||||||
RBAM_030100__      1 ATGAATATGAATACACAAAACGCGAAAAAAACTGAAACTCTTGTTGAGAA     50

BSNT_04909___     45 TTCACTGAACACACAATTATCAAACTGGTTTCTTTTATACTCTAAGCTCC     94
                     .|||.||||||||||||||||||||||||||.|..|.||||||||.||.|
RBAM_030100__     51 ATCAATGAACACACAATTATCAAACTGGTTTATCCTTTACTCTAAACTGC    100

BSNT_04909___     95 ACCGTTTCCATTGGTATGTGAAAGGGCCTCATTTCTTTACATTGCACGAG    144
                     ||||.||||||||||||||.|||||.||.||.||||||||..|.||.||.
RBAM_030100__    101 ACCGCTTCCATTGGTATGTAAAAGGCCCGCACTTCTTTACGCTTCATGAA    150

BSNT_04909___    145 AAATTTGAAGAACTTTATGACTATGCGGCTGAAACAGTGGATACCATCGC    194
                     ||||||||||||||.|||.||.|.|||||.|||||.|.||||.|||||||
RBAM_030100__    151 AAATTTGAAGAACTGTATAACGAAGCGGCGGAAACGGCGGATGCCATCGC    200

BSNT_04909___    195 TGAGCGCCTGCTGGCGATTGGCGGACAGCCTGTTGCCACAGTGAAAGAAT    244
                     .|||||.||.|||||.||.|||||||||||||..||.||..|..|.|..|
RBAM_030100__    201 AGAGCGACTTCTGGCCATCGGCGGACAGCCTGCGGCGACTTTACACGCTT    250

BSNT_04909___    245 ACACTGAGCATGCATCTATCACAGACGGCGGAAACGAAACATCAGCATCA    294
                     ||..|||.||.||.||.||.||.||.|..||..|.||||.|.|.||.||.
RBAM_030100__    251 ACCTTGAACAAGCTTCCATTACGGATGAAGGTCAGGAAAAAACGGCTTCT    300

BSNT_04909___    295 GAAATGGTACAAGCATTGGTAAACGACTACAAACAAATCAGCAGCGAATC    344
                     ||||||||..||.||.||||..|.|||||.||||||||||||.|||||||
RBAM_030100__    301 GAAATGGTGGAATCACTGGTTCAAGACTATAAACAAATCAGCCGCGAATC    350

BSNT_04909___    345 TAAATTCGTGATCGGCCTGGCTGAAGAAAATCAAGACAATG------CGA    388
                     .|||||.||.||||||.|.||.||.|||   |||   ||||      |.|
RBAM_030100__    351 AAAATTTGTCATCGGCATCGCCGAGGAA---CAA---AATGACCCGTCAA    394

BSNT_04909___    389 CAGCGGACTTGTTTGTCGGATTAATTGAAGAAGTTGAAAAACAAGTGTGG    438
                     |.||.|||.||||||||||||||.|||||||||..||.||.||.||||||
RBAM_030100__    395 CTGCCGACCTGTTTGTCGGATTAGTTGAAGAAGCGGACAAGCATGTGTGG    444

BSNT_04909___    439 ATGCTTTCCTCTTACTTAGGATAA---    462
                     |||||.||..|.|||||.|||.||   
RBAM_030100__    445 ATGCTGTCAGCCTACTTGGGAGAATAA    471


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