Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04920 and RBAM_030170

See Amino acid alignment / Visit BSNT_04920 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:27
# Commandline: needle
#    -asequence dna-align/BSNT_04920.1.9828.seq
#    -bsequence dna-align/RBAM_030170.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04920-RBAM_030170.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04920-RBAM_030170.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04920
# 2: RBAM_030170
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity:     146/186 (78.5%)
# Similarity:   146/186 (78.5%)
# Gaps:           0/186 ( 0.0%)
# Score: 570.0
# 
#
#=======================================

BSNT_04920         1 GTGGCACAGGTAAGGCTAGCTGGAAATCAAGAAGAAATTGAACAGCTCAT     50
                     ||||||||.||.||.||.||.||||||...||||||||||||||||||||
RBAM_030170        1 GTGGCACAAGTCAGACTGGCAGGAAATGCCGAAGAAATTGAACAGCTCAT     50

BSNT_04920        51 TAGATCATTTGAAAAGCATTATGATGTCTCTTATACATCAAAGGAGTACG    100
                     .|.||||||||||..||||||.||.||..||||.||.||.||.||.|||.
RBAM_030170       51 CAAATCATTTGAAGCGCATTACGAAGTGGCTTACACGTCGAAAGAATACC    100

BSNT_04920       101 GAAGGACGAATCCAAAATACAAATATTCAAAGGATTCCCGCGTATATCTT    150
                     |.|..||.|||||.||.||.|||||.||.||||||||.|||||.||||||
RBAM_030170      101 GTAAAACAAATCCGAAGTATAAATACTCTAAGGATTCGCGCGTCTATCTT    150

BSNT_04920       151 GAATTAAAATTAAAATCTGCCAAGATCGAAAAATAA    186
                     ||..|.|||||||||.|.||||||..||||||||||
RBAM_030170      151 GAGCTGAAATTAAAAACGGCCAAGGCCGAAAAATAA    186


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