Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04957 and RBAM_030400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:29
# Commandline: needle
# -asequence dna-align/BSNT_04957___yvrL.1.9828.seq
# -bsequence dna-align/RBAM_030400___yvrL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04957___yvrL-RBAM_030400___yvrL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04957___yvrL-RBAM_030400___yvrL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04957___yvrL
# 2: RBAM_030400___yvrL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 241/441 (54.6%)
# Similarity: 241/441 (54.6%)
# Gaps: 123/441 (27.9%)
# Score: 782.0
#
#
#=======================================
BSNT_04957___ 0 -------------------------------------------------- 0
RBAM_030400__ 1 ATGATCAATCAAAACGGGACGAAAATGTTTATTCTTCAGGTGCTCCGGTA 50
BSNT_04957___ 1 --------------TTGACCTATTTTGCTGTCATCTATATATTG------ 30
.||.|.||||.|.|.|..|| |.|||..||
RBAM_030400__ 51 TGCCCTGGCAGCCGCTGCCGTATTATTCGGGTAT-TTTATCGTGATGATG 99
BSNT_04957___ 31 ------TTTTCTTTAGCGGGAACGAGCTACCGCTCAGCAGCTCATGTCCT 74
|||||.|||||.||.|||||||||.|.||....||..|.|||||
RBAM_030400__ 100 GCCGTATTTTCATTAGCCGGGACGAGCTACGGATCGATGGCGTACGTCCT 149
BSNT_04957___ 75 GCTTTTTGCCGTGGTATTTCTTGTTCTCGGATTATGCTTTGAACCATTTG 124
|||||||.|||||.|.|||.||.|||||||.|||||.||||||||..|||
RBAM_030400__ 150 GCTTTTTTCCGTGCTTTTTATTTTTCTCGGTTTATGTTTTGAACCGCTTG 199
BSNT_04957___ 125 AAAGGCTGATGATACATAGTTTTACATTTTTCAAGACAGGAAAACGTCT- 173
|..||||||||||||||||.|||||.|||||...|||.||.| |.||
RBAM_030400__ 200 AGCGGCTGATGATACATAGCTTTACCTTTTTTGGGACGGGCA---GGCTG 246
BSNT_04957___ 174 -ATTCATTCTCCTT---GCCGGCATCGTACAGCTGCTGTTTTTGTGGATG 219
.|| |||||||| |||.|||.|||.|||||||||||..|.||||||
RBAM_030400__ 247 CCTT--TTCTCCTTTTAGCCAGCACCGTTCAGCTGCTGTTCCTCTGGATG 294
BSNT_04957___ 220 ACTGCTCATACAAC----AGACCAATTGATCAGCGACATCTGGCTGTCCA 265
||.||..||||.|| |.||..|||||..|| ||.||||||||.|
RBAM_030400__ 295 ACCGCGTATACGACGGATAAACTGATTGAAAAG----ATTTGGCTGTCAA 340
BSNT_04957___ 266 CCACAGAAGAAATGATTGTCGCAGCCGTTTTTTTGATTTTAGACAAATGC 315
|.||.||.||..|||||||.||.|..||||||||..||||.||.||||||
RBAM_030400__ 341 CGACGGAGGAGCTGATTGTGGCGGGGGTTTTTTTCGTTTTGGATAAATGC 390
BSNT_04957___ 316 AACT-CGGCTCTTCCCAGCTAA------------------- 336
..|| ||| ||..||
RBAM_030400__ 391 GTCTCCGG--------AGAAAAGCAGCCCCGGGCGCAATAA 423
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