Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05131 and RBAM_031270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:36
# Commandline: needle
# -asequence dna-align/BSNT_05131___pgm.1.9828.seq
# -bsequence dna-align/RBAM_031270___pgm2.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05131___pgm-RBAM_031270___pgm2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05131___pgm-RBAM_031270___pgm2.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05131___pgm
# 2: RBAM_031270___pgm2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1536
# Identity: 1360/1536 (88.5%)
# Similarity: 1360/1536 (88.5%)
# Gaps: 0/1536 ( 0.0%)
# Score: 6096.0
#
#
#=======================================
BSNT_05131___ 1 ATGAGTAAAAAACCAGCTGCACTCATCATTCTTGATGGGTTCGGATTACG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031270__ 1 ATGAGTAAAAAACCAGCTGCACTCATCATTCTTGATGGGTTCGGATTACG 50
BSNT_05131___ 51 TAACGAAACAGTAGGGAACGCAGTCGCTTTAGCGAAAAAACCGAATTTTG 100
.||.||||||||.||.|||||||||||...||||||||||||||||||.|
RBAM_031270__ 51 CAATGAAACAGTCGGAAACGCAGTCGCACAAGCGAAAAAACCGAATTTCG 100
BSNT_05131___ 101 ACCGCTATTGGAACCAGTATCCTCATCAAACATTGACTGCTTCAGGCGAG 150
||||.|||||||||||.||.||||||||.||..||||.||.||||||||.
RBAM_031270__ 101 ACCGTTATTGGAACCAATACCCTCATCAGACGCTGACGGCATCAGGCGAA 150
BSNT_05131___ 151 GCTGTAGGTCTTCCTGAAGGGCAAATGGGGAACTCCGAAGTAGGTCACTT 200
||.||.||.||.||||||||.||.|||||||||||.|||||.|||||.||
RBAM_031270__ 151 GCAGTCGGACTGCCTGAAGGACAGATGGGGAACTCTGAAGTCGGTCATTT 200
BSNT_05131___ 201 AAATATCGGTGCGGGACGTATTGTGTACCAAAGCTTAACACGCGTAAATG 250
.||||||||.||.||||||||||||||||||||||||||||||||.||.|
RBAM_031270__ 201 GAATATCGGCGCAGGACGTATTGTGTACCAAAGCTTAACACGCGTGAACG 250
BSNT_05131___ 251 TTGCCATTCGTGAAGGAGAGTTCGAACGCAATCAAACATTCCTTGACGCG 300
|||||||.||.|||||.||.|||||||||||||||||.|||||||||||.
RBAM_031270__ 251 TTGCCATCCGCGAAGGCGAATTCGAACGCAATCAAACGTTCCTTGACGCT 300
BSNT_05131___ 301 ATCAGCAACGCGAAAGAAAACAACAAAGCCTTGCACCTGTTCGGTCTTTT 350
||||..|||||||||||.|||.|||||||..|||||||||||||.|||.|
RBAM_031270__ 301 ATCAAAAACGCGAAAGACAACGACAAAGCGCTGCACCTGTTCGGCCTTCT 350
BSNT_05131___ 351 ATCTGACGGAGGCGTGCACAGCCATATCAATCATTTATTCGCACTGTTAA 400
.||||||||||||||.|||||.||||||||||||||||||||.|||.|.|
RBAM_031270__ 351 TTCTGACGGAGGCGTACACAGTCATATCAATCATTTATTCGCGCTGCTGA 400
BSNT_05131___ 401 AGCTTGCGAAAAAAGAAGGGCTGACAGAGGTTTATATCCATGGCTTCCTT 450
||||||||||||..|||||.|||||..||||.|||||.||.||.|||||.
RBAM_031270__ 401 AGCTTGCGAAAAGTGAAGGACTGACGAAGGTGTATATTCACGGTTTCCTC 450
BSNT_05131___ 451 GACGGCCGTGATGTAGGTCCGCAGACAGCGAAAACGTACATCAACCAGTT 500
||||||||.||||||||||||||.||.||||||||.|||||..|.|||.|
RBAM_031270__ 451 GACGGCCGCGATGTAGGTCCGCAAACGGCGAAAACTTACATTCAGCAGCT 500
BSNT_05131___ 501 GAACGATCAAATCAAGGAAATCGGTGTAGGTGAAATCGCCAGCATTTCCG 550
|||.||.||..||.|.|||||||||||.||.|||||||||||||||||||
RBAM_031270__ 501 GAATGAGCAGGTCGAAGAAATCGGTGTCGGCGAAATCGCCAGCATTTCCG 550
BSNT_05131___ 551 GACGTTACTACTCTATGGACCGCGACAAACGCTGGGACCGTGTAGAAAAA 600
||||.||||||||.|||||||||||||||||||||||||||||.||||||
RBAM_031270__ 551 GACGCTACTACTCCATGGACCGCGACAAACGCTGGGACCGTGTGGAAAAA 600
BSNT_05131___ 601 GCGTACCGCGCAATGGCGTACGGCGAAGGCCCATCTTACCGCAGCGCCCT 650
|||||||||||||||||.||||||||||||||.||||||||||||||..|
RBAM_031270__ 601 GCGTACCGCGCAATGGCTTACGGCGAAGGCCCGTCTTACCGCAGCGCGAT 650
BSNT_05131___ 651 GGATGTTGTTGATGATTCATATGCAAATGGTATCTACGATGAATTCGTGA 700
||||||.||.||.|||||.|||||.||.||.||..|.|||||||||||.|
RBAM_031270__ 651 GGATGTAGTCGACGATTCTTATGCGAACGGCATTCATGATGAATTCGTCA 700
BSNT_05131___ 701 TTCCATCTGTCATCACAAAAGAAAACGGTGAGCCTGTTGCGAAAATCCAA 750
||||.||.|||||||||||||||||||||||.||.|||||||||||.||.
RBAM_031270__ 701 TTCCGTCCGTCATCACAAAAGAAAACGGTGAACCCGTTGCGAAAATTCAT 750
BSNT_05131___ 751 GACGGCGATTCTGTGATTTTCTATAATTTCAGACCGGACCGCGCCATCCA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031270__ 751 GACGGCGATTCTGTGATTTTCTATAATTTCAGACCGGACCGCGCCATCCA 800
BSNT_05131___ 801 GATTTCCAACACGTTCACAAACAAAGACTTCCGTGACTTCGACCGCGGCG 850
||||||.||||||||.||.||||||||.|||||.||.|||||||||||.|
RBAM_031270__ 801 GATTTCAAACACGTTTACCAACAAAGATTTCCGCGATTTCGACCGCGGTG 850
BSNT_05131___ 851 AGAATTATCCAAAGAACCTGTATTTCGTCTGCCTGACTCACTTCAGTGAA 900
|.|||.||||.||.||||||||||||||||||||||||||||||||||||
RBAM_031270__ 851 AAAATCATCCGAAAAACCTGTATTTCGTCTGCCTGACTCACTTCAGTGAA 900
BSNT_05131___ 901 ACAGTTGACGGCTATGTAGCGTTTAAACCGATAAATCTTGATAACACAGT 950
.|.||||||||.|||||.||.|||||||||.||||.|||||.||.||.||
RBAM_031270__ 901 TCTGTTGACGGATATGTGGCTTTTAAACCGGTAAACCTTGACAATACGGT 950
BSNT_05131___ 951 CGGAGAAGTATTATCTCAGCACGGGTTAAAACAGCTTCGAATTGCAGAAA 1000
|||.||||||||..|.|||||||||||||||||||||||.||||||||||
RBAM_031270__ 951 CGGTGAAGTATTGGCACAGCACGGGTTAAAACAGCTTCGCATTGCAGAAA 1000
BSNT_05131___ 1001 CTGAAAAGTATCCGCACGTCACGTTCTTTATGAGCGGCGGCCGTGAAGCT 1050
|||||||||||||||||||.|||||||||||||||||||||||.||||..
RBAM_031270__ 1001 CTGAAAAGTATCCGCACGTTACGTTCTTTATGAGCGGCGGCCGCGAAGAA 1050
BSNT_05131___ 1051 GAATTCCCGGGTGAAGAGCGTATTCTCATCAACTCGCCTAAAGTTGCAAC 1100
|||||||||||.||||||||.||.|||||.||||||||.||.||.||.||
RBAM_031270__ 1051 GAATTCCCGGGCGAAGAGCGCATCCTCATTAACTCGCCGAAGGTCGCGAC 1100
BSNT_05131___ 1101 GTATGACTTGAAGCCTGAGATGAGTGCGTATGAAGTGAAAGACGCGCTTG 1150
.|||||||||||||||||.|||||.||||||||||||||.||.||.||||
RBAM_031270__ 1101 ATATGACTTGAAGCCTGAAATGAGCGCGTATGAAGTGAAGGATGCTCTTG 1150
BSNT_05131___ 1151 TCAAAGAAATTGAAGCTGACAAGCATGACGCGATCATTCTTAACTTCGCA 1200
|.||||||||.|..|||||||||||.|||||||||||.||.|||||.|||
RBAM_031270__ 1151 TAAAAGAAATCGCGGCTGACAAGCACGACGCGATCATCCTGAACTTTGCA 1200
BSNT_05131___ 1201 AACCCTGATATGGTCGGCCACTCCGGAATGGTTGAACCAACAATTAAAGC 1250
||||||||.|||||||||||||||||||||||.|||||.||.||||||||
RBAM_031270__ 1201 AACCCTGACATGGTCGGCCACTCCGGAATGGTCGAACCGACGATTAAAGC 1250
BSNT_05131___ 1251 AATTGAAGCAGTGGACGAATGCTTGGGCGAAGTCGTTGACGCGATCCTTG 1300
||||||||||||||||||||||||.||||||||.||||||||.|||.|.|
RBAM_031270__ 1251 AATTGAAGCAGTGGACGAATGCTTAGGCGAAGTGGTTGACGCCATCATCG 1300
BSNT_05131___ 1301 CTAAAGGCGGACACGCTATCATTACCGCTGATCACGGTAATGCTGACATT 1350
|||||||||||||.||.||||||||||||||||||||||||||.||||||
RBAM_031270__ 1301 CTAAAGGCGGACATGCCATCATTACCGCTGATCACGGTAATGCGGACATT 1350
BSNT_05131___ 1351 CTGATTACAGAATCAGGCGAACCGCACACTGCGCATACAACAAACCCAGT 1400
||||||||||||.|||||||||||||||||||.|||||.|||||||||||
RBAM_031270__ 1351 CTGATTACAGAAACAGGCGAACCGCACACTGCCCATACGACAAACCCAGT 1400
BSNT_05131___ 1401 CCCTGTGATTGTAACGAAAGAAGGCATTACGCTGCGTGAAGGCGGAATCC 1450
||||||.|||||.||||||||||||.|.||||||||.|||||||||||||
RBAM_031270__ 1401 CCCTGTCATTGTGACGAAAGAAGGCGTGACGCTGCGCGAAGGCGGAATCC 1450
BSNT_05131___ 1451 TAGGCGACCTTGCACCAACGTTATTAGACCTTCTTGGTGTTGAAAAACCG 1500
||||||||||.|||||||||||||||||||||||.|||||||||||||||
RBAM_031270__ 1451 TAGGCGACCTCGCACCAACGTTATTAGACCTTCTCGGTGTTGAAAAACCG 1500
BSNT_05131___ 1501 AAAGAAATGACAGGAACATCTTTAATTCAAAAATAA 1536
|||||||||||.||||||||||||||||||||||||
RBAM_031270__ 1501 AAAGAAATGACCGGAACATCTTTAATTCAAAAATAA 1536
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