Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05132 and RBAM_031280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:37
# Commandline: needle
# -asequence dna-align/BSNT_05132___tpiA.1.9828.seq
# -bsequence dna-align/RBAM_031280___tpiA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05132___tpiA-RBAM_031280___tpiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05132___tpiA-RBAM_031280___tpiA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05132___tpiA
# 2: RBAM_031280___tpiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 762
# Identity: 712/762 (93.4%)
# Similarity: 712/762 (93.4%)
# Gaps: 0/762 ( 0.0%)
# Score: 3360.0
#
#
#=======================================
BSNT_05132___ 1 ATGAGAAAACCAATTATCGCCGGTAACTGGAAAATGAACAAAACACTCGG 50
|||||||||||||||||.||||||||||||||||||||||||||||||||
RBAM_031280__ 1 ATGAGAAAACCAATTATAGCCGGTAACTGGAAAATGAACAAAACACTCGG 50
BSNT_05132___ 51 CGAAGCTGTCAGCTTCGTTGAAGAAGTGAAATCTTCCATTCCAGCAGCAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031280__ 51 CGAAGCTGTCAGCTTCGTTGAAGAAGTGAAATCTTCCATTCCAGCAGCAG 100
BSNT_05132___ 101 ACAAAGCTGAAGCTGTTGTTTGCGCGCCAGCGCTTTTCTTAGAAAAGCTT 150
|||||||.|||||.|||||||||||.|||||.|||||||||||||||||.
RBAM_031280__ 101 ACAAAGCGGAAGCCGTTGTTTGCGCACCAGCTCTTTTCTTAGAAAAGCTG 150
BSNT_05132___ 151 GCTTCTGCTGTGAAAGGCACTGACCTAAAAGTCGGCGCTCAAAACATGCA 200
.||||||||||.|||||.||||||||.|||||||||||.|||||||||||
RBAM_031280__ 151 ACTTCTGCTGTTAAAGGAACTGACCTGAAAGTCGGCGCCCAAAACATGCA 200
BSNT_05132___ 201 CTTCGAAGAAAGCGGCGCGTTCACAGGCGAAATCAGCCCGGTTGCTCTGA 250
.||.|||||||.|||.|||||||||||.||||||||||||||.|||||||
RBAM_031280__ 201 TTTTGAAGAAAACGGTGCGTTCACAGGTGAAATCAGCCCGGTCGCTCTGA 250
BSNT_05132___ 251 AAGACCTTGGCGTTGACTACTGCGTCATCGGCCACTCTGAGCGCCGTGAA 300
|||||||||||||.||.|||||||||||||||||||||||||||||||||
RBAM_031280__ 251 AAGACCTTGGCGTGGATTACTGCGTCATCGGCCACTCTGAGCGCCGTGAA 300
BSNT_05132___ 301 ATGTTCGCTGAAACTGATGAAACAGTTAACAAAAAAGCACATGCAGCTTT 350
||||||||||||||||||||||||||||||||||||||.|||||.|||||
RBAM_031280__ 301 ATGTTCGCTGAAACTGATGAAACAGTTAACAAAAAAGCGCATGCCGCTTT 350
BSNT_05132___ 351 CAAACACGGCATTGTGCCGATCATCTGTGTAGGTGAAACGCTTGAAGAGC 400
||||||||||||||||||||||||.||.||||||||||||||||||||||
RBAM_031280__ 351 CAAACACGGCATTGTGCCGATCATTTGCGTAGGTGAAACGCTTGAAGAGC 400
BSNT_05132___ 401 GTGAAGCCGGCAAAACAAATGATCTTGTTGCTGACCAAGTGAAAAAAGGC 450
|.||||||||.||||||||||||||||||||.||.||||||||||||||.
RBAM_031280__ 401 GCGAAGCCGGAAAAACAAATGATCTTGTTGCCGATCAAGTGAAAAAAGGT 450
BSNT_05132___ 451 CTTGCTGGTCTTTCTGAAGAACAAGTTGCTGCTTCTGTTATTGCGTATGA 500
|||||.||||||||||||||.||||||||||||||||||||||||||.||
RBAM_031280__ 451 CTTGCGGGTCTTTCTGAAGAGCAAGTTGCTGCTTCTGTTATTGCGTACGA 500
BSNT_05132___ 501 GCCAATCTGGGCAATCGGAACAGGCAAATCTTCTACAGCGAAAGATGCGA 550
||||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_031280__ 501 GCCAATCTGGGCAATCGGAACAGGCAAATCTTCTACAGCGAAAGATGCTA 550
BSNT_05132___ 551 ATGACGTGTGTGCGCATATCCGTAAAACCGTCGCTGAAAGCTTCAGCCAA 600
|.|||||.||.|||||||||||||||..|||.|||||||||||||||||.
RBAM_031280__ 551 ACGACGTCTGCGCGCATATCCGTAAAGTCGTTGCTGAAAGCTTCAGCCAG 600
BSNT_05132___ 601 GAAGCTGCAGACAAGCTTCGCATCCAATATGGCGGAAGCGTAAAGCCTGC 650
|||.||||.||||||||.|||||.|||||.|||||.||||||||.|||||
RBAM_031280__ 601 GAAACTGCTGACAAGCTCCGCATTCAATACGGCGGCAGCGTAAAACCTGC 650
BSNT_05132___ 651 AAACATTAAAGAATATATGGCAGAGTCCGATATTGACGGTGCTTTGGTCG 700
|||.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031280__ 651 AAATATTAAAGAATATATGGCAGAGTCCGATATTGACGGTGCTTTGGTCG 700
BSNT_05132___ 701 GCGGCGCGAGCCTTGAGCCACAGTCATTCGTTCAATTATTGGAGGAAGGT 750
|||||||.||||||||.||.||||||||||||||||||||||||||||||
RBAM_031280__ 701 GCGGCGCAAGCCTTGAACCGCAGTCATTCGTTCAATTATTGGAGGAAGGT 750
BSNT_05132___ 751 CAATATGAGTAA 762
||||||||||||
RBAM_031280__ 751 CAATATGAGTAA 762
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