Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05191 and RBAM_031650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence dna-align/BSNT_05191___yveM.1.9828.seq
# -bsequence dna-align/RBAM_031650___epsC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05191___yveM-RBAM_031650___epsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05191___yveM-RBAM_031650___epsC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05191___yveM
# 2: RBAM_031650___epsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1817
# Identity: 1417/1817 (78.0%)
# Similarity: 1417/1817 (78.0%)
# Gaps: 43/1817 ( 2.4%)
# Score: 5495.0
#
#
#=======================================
BSNT_05191___ 1 ATGATTATTGCGCTGGATACTTACCTCGTTTTAAATTCAGTTATTGCAGG 50
||||||.||||..|||||||.||.|||||||||..|||.|||.||..|||
RBAM_031650__ 1 ATGATTTTTGCATTGGATACGTATCTCGTTTTACTTTCCGTTGTTATAGG 50
BSNT_05191___ 51 ATATCAATTTTTAAAGGATTCCTATCAATTTTATGACTCCGGAGCATTAC 100
||||||||||||..|||||||.|||||.|||||||||||||||||.||.|
RBAM_031650__ 51 ATATCAATTTTTTGAGGATTCTTATCACTTTTATGACTCCGGAGCGTTGC 100
BSNT_05191___ 101 TGCTTACCGCTGTCAGCTTGCTCCTCAGCTATCATGTGTGTGCTTTCCTG 150
||||.||.||.||.|||.||||..|||||.|||||||.||.|||||..||
RBAM_031650__ 101 TGCTGACTGCCGTGAGCATGCTGATCAGCCATCATGTATGCGCTTTTATG 150
BSNT_05191___ 151 TTCAATCAGTATAAACAGGTGTGGACATACACCGGACTTGGCGAGCTGAT 200
||..|.||||||||.|||||.|||||.|||||.|||.|.||.||||||.|
RBAM_031650__ 151 TTTCACCAGTATAAGCAGGTATGGACGTACACGGGAATAGGAGAGCTGCT 200
BSNT_05191___ 201 TGTCCTGCTTAAGGGGATTACGCTTTCCGCCGCTGTGACCGGTATCATTC 250
||..|||||.||||||||.|||||.|||||.||||||||.|....|.|.|
RBAM_031650__ 201 TGATCTGCTGAAGGGGATCACGCTGTCCGCAGCTGTGACAGCCGCCGTCC 250
BSNT_05191___ 251 AGTATGCTGTGTATCATACGATGTTCTTCCGTCTGTTAACCGCGTGCTGG 300
|.||.|..||||..||.|||||.||.|||||.|||||..|||...|||||
RBAM_031650__ 251 AATACGGGGTGTTCCACACGATTTTGTTCCGGCTGTTGGCCGTCAGCTGG 300
BSNT_05191___ 301 GTGCTTCAGCTTTTGTCTATTGGAGGGACCCGTATTTTATCCAGAGTATT 350
.||.|||||||.||||..||.|||||.|.|||.||..|.||..|.||..|
RBAM_031650__ 301 ATGGTTCAGCTATTGTTCATCGGAGGAAGCCGGATGATTTCACGGGTGCT 350
BSNT_05191___ 351 AAACGAAAGCAT---CAGGAA--AAAACGCTGCGCCTCGTCCCGCGCGCT 395
.||.||||..|| |||||| |||| .|.|||.|||.|.|||||
RBAM_031650__ 351 GAAAGAAACGATCGGCAGGAAGCAAAA-----TGACTCTTCCAGGGCGCT 395
BSNT_05191___ 396 GATTATCGGGGCGGGCTCAGGTGGGACTCTGATGGTCAGGCAGCTGCTTT 445
|||.|||||.||.||..|.||.|||||.|||.|.|||.|.|| ||||.
RBAM_031650__ 396 GATCATCGGCGCAGGTGCGGGGGGGACGCTGCTCGTCCGTCA---GCTTA 442
BSNT_05191___ 446 C---GAAAGATGAAC-CTGATATCATACCTGTCGCTTTTATTGATGACGA 491
| ||||.|.||.| |.|| |||||.|||||.||||||||||||||.||
RBAM_031650__ 443 CCCAGAAAAACGATCTCGGA-ATCATGCCTGTGGCTTTTATTGATGATGA 491
BSNT_05191___ 492 CCAAACGAAGCATAAATTAGAAATTATGGGGCTGCCCGTAATCGGCGGTA 541
.||.|||||||||||..|.|||||.|||||.||||||||.||||||||.|
RBAM_031650__ 492 TCAGACGAAGCATAAGCTCGAAATCATGGGCCTGCCCGTCATCGGCGGAA 541
BSNT_05191___ 542 AAGAAAGTATCATGCCTGCGGTGCAAAAGCTCAAAATTAATTATATTATT 591
|||||||.||.|||||.||.|||||.|.|||.|.||||.|..|||||||.
RBAM_031650__ 542 AAGAAAGCATTATGCCGGCAGTGCAGAGGCTGAGAATTCACCATATTATC 591
BSNT_05191___ 592 ATTGCCATTCCTTCACTCCGCACCCATGAGCTTCAGGTGTTATATAAAGA 641
|||||||||||.||.||..|||||||||||||||||..||||||.|||||
RBAM_031650__ 592 ATTGCCATTCCGTCTCTTTGCACCCATGAGCTTCAGACGTTATACAAAGA 641
BSNT_05191___ 642 ATGTGTGCGAACCGGAGTAAGC----ATTAAAATTATGCCTCATTTTGAT 687
||||||||..||.|| .|| ||||||||.|||||.||.||||||
RBAM_031650__ 642 ATGTGTGCAGACGGG----CGCCCATATTAAAATCATGCCGCAATTTGAT 687
BSNT_05191___ 688 GAAATGCTGCTTGGCACACGAACTGCCGGACAAATCAGAGATGTAAAGGC 737
||.||.|||||.||.||.|...||||||||||.||||||||||||||.||
RBAM_031650__ 688 GAGATCCTGCTCGGAACGCAGGCTGCCGGACACATCAGAGATGTAAAAGC 737
BSNT_05191___ 738 TGAGGACTTGCTCGGCAGAAAGCCGGTAACCCTCGACACTAGCGAAATTT 787
.||.||..|||||||||||||||||||.|||||.||.||.|||.||||||
RBAM_031650__ 738 CGAAGATCTGCTCGGCAGAAAGCCGGTCACCCTTGATACGAGCAAAATTT 787
BSNT_05191___ 788 CGAACCGCATCAAAGGAAAAACAGTTCTTGTCACGGGAGCGGGCGGATCA 837
|..||.|||||||.||||||||..||||.||||||||.||.|||||.|||
RBAM_031650__ 788 CTGACAGCATCAAGGGAAAAACGATTCTGGTCACGGGCGCCGGCGGCTCA 837
BSNT_05191___ 838 ATCGGCTCGGAAATCTGCCGTCAGATCAGTGCGTTTCAGCCTAAGGAAAT 887
|||||.||.||.||||||||.||||||||.|||||||..||...||||||
RBAM_031650__ 838 ATCGGTTCTGAGATCTGCCGCCAGATCAGCGCGTTTCTTCCGCGGGAAAT 887
BSNT_05191___ 888 CATTCTGCTCGGCCATGGGGAAAACAGCATTCATTCGATTTATACAGAGC 937
|.|.||.||||||||.|||||.||||||||||||||..|..||||.||||
RBAM_031650__ 888 CGTCCTTCTCGGCCACGGGGAGAACAGCATTCATTCTGTACATACCGAGC 937
BSNT_05191___ 938 TGAACGGACGATTCGGCAAACACATTGTGTTCCATACGGAAATCGCTGAT 987
||..||.|||.|||||||||.|..|..|.||.||..||||.|||||.|||
RBAM_031650__ 938 TGTCCGCACGCTTCGGCAAAGAGGTGCTCTTTCACGCGGAGATCGCCGAT 987
BSNT_05191___ 988 GTGCAGGACCGCGATAAAATGTTTACCTTGATGAAAAAATACGAGCCGCA 1037
.|.||||||.|.||||||||.|||||.|||||||||||||||||||||||
RBAM_031650__ 988 ATTCAGGACAGAGATAAAATCTTTACTTTGATGAAAAAATACGAGCCGCA 1037
BSNT_05191___ 1038 TGTTGTCTATCATGCAGCTGCCCATAAGCATGTGCCTTTAATGGAACACA 1087
.||.|||||||||||.|||||||||||.||||||||.|||||||||||.|
RBAM_031650__ 1038 CGTCGTCTATCATGCGGCTGCCCATAAACATGTGCCATTAATGGAACATA 1087
BSNT_05191___ 1088 ATCCTGAAGAGGCGGTCAAAAACAATATTATCGGAACAAAAAATGTCGCG 1137
||||.|||||.||.||.||||||||.||||||||.||.|||||||||||.
RBAM_031650__ 1088 ATCCGGAAGAAGCCGTTAAAAACAACATTATCGGCACGAAAAATGTCGCC 1137
BSNT_05191___ 1138 GAAGCAGCCGATATGTCGGGAACAGAGACATTCGTGCTGATTTCATCGGA 1187
|||||.|||||.||||..|||||.||.|||||||||||||||||.||.||
RBAM_031650__ 1138 GAAGCCGCCGACATGTGCGGAACGGAAACATTCGTGCTGATTTCTTCTGA 1187
BSNT_05191___ 1188 CAAAGCGGTGAACCCAGCCAACGTAATGGGGGCGACAAAACGATTCGCAG 1237
|||||||||.||.||.|||||.||.|||||.|||||.|||||.||.||.|
RBAM_031650__ 1188 CAAAGCGGTCAATCCGGCCAATGTCATGGGCGCGACGAAACGGTTTGCGG 1237
BSNT_05191___ 1238 AGATGATTATTATGAATCTTGGGAAAGTCAGCAGAACCAAATTTGTTGCT 1287
|.|||.|.||.|||||.||.||.||.||||||.|.||||||||.|..||.
RBAM_031650__ 1238 AAATGGTCATCATGAACCTCGGAAAGGTCAGCCGCACCAAATTCGCCGCC 1287
BSNT_05191___ 1288 GTTCGCTTCGGCAATGTACTCGGGAGCCGCGGCAGCGTCATTCCGATTTT 1337
||.||.|||||.|||||.|||||.||||||||||||||||||||||||||
RBAM_031650__ 1288 GTCCGTTTCGGAAATGTGCTCGGAAGCCGCGGCAGCGTCATTCCGATTTT 1337
BSNT_05191___ 1338 CAAAAAACAGATTGAAAAAGGCGGCCCGGTGACAGTAACACATCCGGCAA 1387
||||||.|||||||||||||||||.||.||.||.||.||.||.|||||.|
RBAM_031650__ 1338 CAAAAAGCAGATTGAAAAAGGCGGACCCGTCACCGTCACGCACCCGGCGA 1387
BSNT_05191___ 1388 TGACCCGCTATTTCATGACGATTCCCGAGGCATCAAGGCTTGTGATTCAG 1437
||||..|.|||||.||||||||||||||.||.|||||.||.||.||||||
RBAM_031650__ 1388 TGACAAGATATTTTATGACGATTCCCGAAGCGTCAAGACTCGTCATTCAG 1437
BSNT_05191___ 1438 GCTGGGGCACTGGCGAAAGGGCGTCAAATTTTCGTTCTCGATATGGGAGA 1487
||.|||||.||.||.||||||||.||.|||||||||||.|||||||||||
RBAM_031650__ 1438 GCGGGGGCGCTTGCAAAAGGGCGGCAGATTTTCGTTCTGGATATGGGAGA 1487
BSNT_05191___ 1488 GCCCGTAAAGATTGTGGATCTTGCCAAAAACCTCATTCATTTGTCCGGCT 1537
.|||||.||.||.||.|||||.|||||||||||.||||||||.||.||||
RBAM_031650__ 1488 ACCCGTCAAAATCGTCGATCTGGCCAAAAACCTGATTCATTTATCAGGCT 1537
BSNT_05191___ 1538 ACACGACTGAGCAGGTTCCAATCGAATTCACAGGCATTCGTCCGGGCGAA 1587
|.|||||.||.|||.||||.|||||||||.|.|||||.||.|||||.|||
RBAM_031650__ 1538 ATACGACAGAACAGATTCCCATCGAATTCTCCGGCATCCGCCCGGGAGAA 1587
BSNT_05191___ 1588 AAAATGTATGAAGAATTACTGAACAAAAATGAAGTCCATGCTGAACAAAT 1637
||.||||||||||||||.|||||..|.||||||||.|||.|.||.||.||
RBAM_031650__ 1588 AAGATGTATGAAGAATTGCTGAATCATAATGAAGTACATACGGAGCAGAT 1637
BSNT_05191___ 1638 CTTTCCAAAAATTCACATCGGTAAAGCGGTAGATGGCGATTGGCCGGTGC 1687
.|||||.|||||.||.|||||.||||||||.||.||..|||||.|.||||
RBAM_031650__ 1638 TTTTCCGAAAATCCATATCGGGAAAGCGGTGGACGGGAATTGGGCCGTGC 1687
BSNT_05191___ 1688 TGATGCGCTTTATCGAGGATTTTCATAAG-CTGCCGGAAGCTGACCTGAG 1736
|.||.||.|||||.||||| .||||...| |||||.||||..||.|||||
RBAM_031650__ 1688 TCATCCGTTTTATGGAGGA-ATTCAGCCGTCTGCCTGAAGAAGAGCTGAG 1736
BSNT_05191___ 1737 AGCGAGGCTGTTTGCGGC-----AATCAATACATCAGAAGAAATGACGGC 1781
|...||||||||||.||| |||||.||||| |||||| .||||
RBAM_031650__ 1737 AAAAAGGCTGTTTGAGGCAATCGAATCAGTACAT--GAAGAA---GCGGC 1781
BSNT_05191___ 1782 TGCCAGCGT-TCATTAG 1797
.||..|||| |.|
RBAM_031650__ 1782 CGCAGGCGTGTGA---- 1794
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