Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05194 and RBAM_031680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence dna-align/BSNT_05194___slr.1.9828.seq
# -bsequence dna-align/RBAM_031680___slr.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05194___slr-RBAM_031680___slr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05194___slr-RBAM_031680___slr.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05194___slr
# 2: RBAM_031680___slr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 473
# Identity: 347/473 (73.4%)
# Similarity: 347/473 (73.4%)
# Gaps: 31/473 ( 6.6%)
# Score: 1235.0
#
#
#=======================================
BSNT_05194___ 1 ATGATTGGAAGAATTATCCGTTTGTACCGTAAAAGAAAAGGCTATTCTAT 50
||||||||||||||.||.|||||.|||||.|.||||||||||||.|||||
RBAM_031680__ 1 ATGATTGGAAGAATAATTCGTTTATACCGCAGAAGAAAAGGCTACTCTAT 50
BSNT_05194___ 51 TAATCAGCTGGCTGTTGAGTCAGGCGTATCCAAATCCTATTTAAGCAAAA 100
|||||||||.||.|||||..||||.||.||.|||||.|||||||||||.|
RBAM_031680__ 51 TAATCAGCTAGCAGTTGAAGCAGGTGTCTCTAAATCTTATTTAAGCAAGA 100
BSNT_05194___ 101 TTGAAAGAGGCGTTCACACGAATCCGTCCGTTCAATTTTTAAAAAAAGTT 150
|.|||.|.||.||||||.|.|||||.|||.|.||||||.|.|||||.||.
RBAM_031680__ 101 TAGAACGGGGGGTTCACTCAAATCCATCCATCCAATTTCTGAAAAAGGTA 150
BSNT_05194___ 151 TCTGCCACACTGGAAGTTGAATTAACAGAATTATTTGACGCAGAAACAAT 200
||||||||.|||.|.||.||..|.||.||..|.|||||.||.|||||.||
RBAM_031680__ 151 TCTGCCACCCTGCAGGTCGATCTGACGGAGCTTTTTGATGCCGAAACGAT 200
BSNT_05194___ 201 GATGTATGAAAAAATCAGCGG-----CGGTGAAGAAGAATGGCGCGTACA 245
|.||.||.| ||..|| || |||||.||.||||||.|.||
RBAM_031680__ 201 GCTGCATCA------CATGGGAGACACG--GAAGATGAGTGGCGCATCCA 242
BSNT_05194___ 246 TTTAGTGCAAGCCGTACAAGCCGGG-ATG--GAAAAGGAAGAATTGTTCA 292
..|.|||||.|||||.| ||.|||| ||| |||| ||||||.||||||
RBAM_031680__ 243 CCTTGTGCAGGCCGTGC-AGTCGGGCATGCCGAAA--GAAGAACTGTTCA 289
BSNT_05194___ 293 CTTTTACGAACAGGCT-AAAGAAAGAACAGCCTGAAACTGCCTCTTACCG 341
|.||||||||||..|| |..|||| |||..||.||..|.||..|.|||||
RBAM_031680__ 290 CCTTTACGAACAAACTGACTGAAA-AACGCCCGGAGCCCGCACCCTACCG 338
BSNT_05194___ 342 CAACCGTAAATTGACGGAATCCAATATAGAAGAATGGAAAGCGCTGATGG 391
||||.|.|||.||||.||||||||.||.||.|||||||||||.||||||.
RBAM_031680__ 339 CAACAGAAAACTGACTGAATCCAACATTGAGGAATGGAAAGCTCTGATGC 388
BSNT_05194___ 392 CGGAAGCAAGAGAAATCGGCTTGACTGTCTATGAAGTCAAATCCTTTTTA 441
.||||||.|.||||.||||||||.|.||..|.|||||||.|||.||||||
RBAM_031680__ 389 AGGAAGCCAAAGAACTCGGCTTGTCCGTTCAGGAAGTCAGATCATTTTTA 438
BSNT_05194___ 442 AAAACAATGGGAAG-----ATGA 459
.|| .||||| .|||
RBAM_031680__ 439 GAA-----CGGAAGCGTTACTGA 456
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