Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04730 and RBAM_031720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence dna-align/BSNT_04730___paiA.1.9828.seq
# -bsequence dna-align/RBAM_031720___paiA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04730___paiA-RBAM_031720___paiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04730___paiA-RBAM_031720___paiA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04730___paiA
# 2: RBAM_031720___paiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 532
# Identity: 395/532 (74.2%)
# Similarity: 395/532 (74.2%)
# Gaps: 20/532 ( 3.8%)
# Score: 1462.0
#
#
#=======================================
BSNT_04730___ 1 ------ATGAGTGTAAAAATGAAAAAATGCAGCCGGGAAGATTTACAAAC 44
||||||.|..||.|.|||||.|||||||...|.|||.| |||
RBAM_031720__ 1 ATGACCATGAGTATTCAATTAAAAAAGTGCAGCCTTAACGATAT---AAC 47
BSNT_04730___ 45 A---CTTCAACAATTGAGTATTGAAACATTCAATGACACTTTTAAAGAAC 91
| ||.|...|..|.||.|||||||||||||||||.||.|||||.||.|
RBAM_031720__ 48 AGAGCTCCGGGAGATAAGCATTGAAACATTCAATGATACATTTAAGGATC 97
BSNT_04730___ 92 AGAACTCACCTGAAAATATGAAAGCCTATTTAGAAAGCGCATTTAACACT 141
|.||.|||||.||||||||||||||.|||||.||||..|||||...|.||
RBAM_031720__ 98 AAAATTCACCAGAAAATATGAAAGCTTATTTGGAAAATGCATTCCGCTCT 147
BSNT_04730___ 142 GAGCAGCTGGAAAAAGAGTTATGCAATATGTCTTCGCAATTCTTTTTTGT 191
||.||||||.||||.||.||||.||||.|||||||.|||||||.||||||
RBAM_031720__ 148 GAACAGCTGAAAAAGGAATTATCCAATCTGTCTTCTCAATTCTATTTTGT 197
BSNT_04730___ 192 TTACTTTGATTATGAAATCGCTGGATATGTAAAGGTCAATATCGATGATG 241
|||.|.|.||.||||..|.||.||.||||||||.|||||.||..|.||.|
RBAM_031720__ 198 TTATTATCATGATGACCTTGCGGGGTATGTAAAAGTCAACATGAACGAAG 247
BSNT_04730___ 242 CTCAGTCTGAAGAAATGGGTGCTGAATCACTTGAAATCGAGAGAATTTAT 291
|.||.||.|||.|||||||||..||.||.|||||.||.|||.||||||||
RBAM_031720__ 248 CACAATCAGAAAAAATGGGTGAAGATTCTCTTGAGATTGAGCGAATTTAT 297
BSNT_04730___ 292 ATAAAGAACAGCTTTCAAAAACATGGGCTTGGCAAACATCTGTTGAATAA 341
||||..||.|.|...||.|||||.||||||||||||.|||||.|||||.|
RBAM_031720__ 298 ATAAGAAAAAACCACCAGAAACACGGGCTTGGCAAATATCTGCTGAATGA 347
BSNT_04730___ 342 AGCGATAGAAATTGC----GCTGGAACGTAATAAAAAGAACATTTGGCTA 387
|||..|..||||.|| || ||..|||||||||||.||.|||||.
RBAM_031720__ 348 AGCTGTGAAAATCGCAACAGC----ACACAATAAAAAGAAAATCTGGCTG 393
BSNT_04730___ 388 GGTGTGTGGGAAAAAAATGAAAATGCCATTGCCTTTTATAAGAAAATGGG 437
||.||.|||||||||||.||||||||.||.|||||||||.|.||||||||
RBAM_031720__ 394 GGCGTATGGGAAAAAAACGAAAATGCAATCGCCTTTTATCAAAAAATGGG 443
BSNT_04730___ 438 GTTTGTTCAGACCGGCGCCCACTCTTTTTATATGGGTGATGAAGAACAAA 487
||||||.||.|||||.|..|||||||||||||||||.|||||..|||||.
RBAM_031720__ 444 GTTTGTCCAAACCGGAGAACACTCTTTTTATATGGGGGATGATAAACAAG 493
BSNT_04730___ 488 CGGATTTAATCATGGCTAAAACACTCATATAA 519
..||.||.||||||.|.|||||.||....|||
RBAM_031720__ 494 TCGACTTTATCATGACCAAAACCCTGTCGTAA 525
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