Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05291 and RBAM_031970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence dna-align/BSNT_05291___yvcL.1.9828.seq
# -bsequence dna-align/RBAM_031970___yvcL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05291___yvcL-RBAM_031970___yvcL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05291___yvcL-RBAM_031970___yvcL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05291___yvcL
# 2: RBAM_031970___yvcL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 951
# Identity: 814/951 (85.6%)
# Similarity: 814/951 (85.6%)
# Gaps: 0/951 ( 0.0%)
# Score: 3522.0
#
#
#=======================================
BSNT_05291___ 1 ATGTCATTTGCATCAGAAACAAAAAAAGAATTAACGAATCTGGAAGTGAA 50
||||||||||||||.|||||||||||||||.|.|||||||||||||||||
RBAM_031970__ 1 ATGTCATTTGCATCGGAAACAAAAAAAGAACTGACGAATCTGGAAGTGAA 50
BSNT_05291___ 51 GGACTGCTGCATTAATGCCGAGCTGTCTGCACTCATTCGGATGAATGGAG 100
||||||||||...||.||.||||||||.||.||.|||||||||||.||..
RBAM_031970__ 51 GGACTGCTGCGCCAAGGCGGAGCTGTCCGCGCTGATTCGGATGAACGGTT 100
BSNT_05291___ 101 CTTTATCATTTACAAACCGCCATCTCGTACTCGATGTTCAAACCGAAAAC 150
|..|.||||||.||||||||||||||||.||.||.||||||||||||||.
RBAM_031970__ 101 CACTGTCATTTTCAAACCGCCATCTCGTGCTTGACGTTCAAACCGAAAAT 150
BSNT_05291___ 151 GCGGCGATTGCCCGCCGCATCTATACATTGCTGAAAAAACAATATGATGT 200
||||||||||||||||||||.||||||||||||||.||||||||||||||
RBAM_031970__ 151 GCGGCGATTGCCCGCCGCATTTATACATTGCTGAAGAAACAATATGATGT 200
BSNT_05291___ 201 GTCGGTCGAGCTGCTGGTCAGAAAGAAAATGCGGCTGAAAAAGAATAACG 250
.||||||||.|||.|.||||||||.|||||||||||||||||.||.||.|
RBAM_031970__ 201 ATCGGTCGAACTGTTAGTCAGAAAAAAAATGCGGCTGAAAAAAAACAATG 250
BSNT_05291___ 251 TCTATATTGTGCGTTTTTCAGAAAATGCAAAAACGATCTTAGAGGATTTA 300
|.|||||||||||.|||||.|||||||||||...|||.||||||||.||.
RBAM_031970__ 251 TTTATATTGTGCGCTTTTCTGAAAATGCAAAGCTGATTTTAGAGGAATTG 300
BSNT_05291___ 301 AAAATACTCGGGGAGAATTTTGTGTTTGAACGAAGTATTTCGAAAGAGCT 350
|||||.|||||.|||||.|||||.||||||||.|.||||||..|.||.||
RBAM_031970__ 301 AAAATCCTCGGAGAGAACTTTGTATTTGAACGGAATATTTCTGAGGAACT 350
BSNT_05291___ 351 GGTTAAAAAGAGGTGCTGCAAGCGTTCTTATATGAGAGGAGCATTTTTGG 400
|||....||..|.||||||||.|||||||||||||||||.||.|||||||
RBAM_031970__ 351 GGTGGCGAAACGCTGCTGCAAACGTTCTTATATGAGAGGGGCGTTTTTGG 400
BSNT_05291___ 401 CAGGAGGTTCGGTCAATAACCCGGAAACCTCCTCGTATCATTTAGAAATC 450
|.||.||.||.||.|||||.||.|||||.||.|||||.||.||.||||||
RBAM_031970__ 401 CGGGGGGATCTGTGAATAATCCCGAAACATCGTCGTACCACTTGGAAATC 450
BSNT_05291___ 451 TTCTCTCTTTATAAGGAGCATAACGATTCATTATGTGACCTGTTAAATGA 500
|||||.|||||||||||.|||||||||||||||||.|..|||.|.|||||
RBAM_031970__ 451 TTCTCGCTTTATAAGGAACATAACGATTCATTATGCGCGCTGCTGAATGA 500
BSNT_05291___ 501 GTTTCAGTTAAACAGCAAAACGCTTGAACGGAAAAAAGGCTATATTACCT 550
.|||||..|.||||||||||||||||||||||||||||||||||||||.|
RBAM_031970__ 501 ATTTCATCTGAACAGCAAAACGCTTGAACGGAAAAAAGGCTATATTACGT 550
BSNT_05291___ 551 ATTTAAAAGAGGCTGAAAAGATTACAGAGTTTCTGAACGTAATTGGCGCT 600
|||||||||||||.|||||.||.||.||.||||||||.||.||.||||||
RBAM_031970__ 551 ATTTAAAAGAGGCGGAAAAAATCACTGAATTTCTGAATGTCATCGGCGCT 600
BSNT_05291___ 601 CACAATTCGCTTCTGCGATTTGAGGATGTCAGAATCGTCCGGGACATGAG 650
||||||||.||.|||||.|||||.|||||..|.||.|||.|.||||||||
RBAM_031970__ 601 CACAATTCACTGCTGCGTTTTGAAGATGTGCGGATTGTCAGAGACATGAG 650
BSNT_05291___ 651 AAATTCGGTCAACCGCCTCGTCAATTGTGAAACAGCCAACTTAAACAAAA 700
|||.||.||.||||||||||||||||||||||||||.|||||||||||||
RBAM_031970__ 651 AAACTCAGTGAACCGCCTCGTCAATTGTGAAACAGCAAACTTAAACAAAA 700
BSNT_05291___ 701 CGATCGGCGCATCGCTGAGACAGGTGGAAAATATTAAATACATCGATGAA 750
|.|||||.||.||.||.||||||||||||||||||||||||||.||||||
RBAM_031970__ 701 CCATCGGTGCTTCTCTCAGACAGGTGGAAAATATTAAATACATTGATGAA 750
BSNT_05291___ 751 AGAATCGGCCTGGAGGCGCTGCCTGAAAAACTTCGGGAAATTGCGCAGCT 800
.|.|||||.||.||.||||||||.|||||.|||||.||||||||||||||
RBAM_031970__ 751 CGGATCGGTCTTGAAGCGCTGCCGGAAAAGCTTCGCGAAATTGCGCAGCT 800
BSNT_05291___ 801 TCGGATTGATTATCAGGAAGTGACGCTGAAAGAGCTGGGGGAAATGGTAG 850
.|||||||||||||||||.||.|||||||||||.||||||||||||||.|
RBAM_031970__ 801 GCGGATTGATTATCAGGAGGTCACGCTGAAAGAACTGGGGGAAATGGTTG 850
BSNT_05291___ 851 CAAGCGGGAAAATCAGCAAATCAGGGATCAATCACAGGCTGAGAAAACTT 900
||||||||||||||||||||||.||.||||||||||||||||||||.||.
RBAM_031970__ 851 CAAGCGGGAAAATCAGCAAATCCGGCATCAATCACAGGCTGAGAAAGCTC 900
BSNT_05291___ 901 GACGAAATCGCAGAACAGCTGCGGACTGGGCAAACCGTCACTTTAAAATA 950
||.||||||||||||||||||||.||.||.||||.|.|||||||.|||||
RBAM_031970__ 901 GATGAAATCGCAGAACAGCTGCGTACAGGACAAAGCATCACTTTGAAATA 950
BSNT_05291___ 951 A 951
|
RBAM_031970__ 951 A 951
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