Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05294 and RBAM_032000
See
Amino acid alignment /
Visit
BSNT_05294 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence dna-align/BSNT_05294___yvcI.1.9828.seq
# -bsequence dna-align/RBAM_032000___yvcI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05294___yvcI-RBAM_032000___yvcI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05294___yvcI-RBAM_032000___yvcI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05294___yvcI
# 2: RBAM_032000___yvcI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 478
# Identity: 393/478 (82.2%)
# Similarity: 393/478 (82.2%)
# Gaps: 11/478 ( 2.3%)
# Score: 1649.0
#
#
#=======================================
BSNT_05294___ 1 GTGACGTACTTGCAAAGAGTGACAAATTGTGTGCTTCAGACGGATGACAA 50
.|||||||||||||||||||||||||.|||||.|||||..|
RBAM_032000__ 1 ---------GTGCAAAGAGTGACAAATTGTGTGCTGCAGACAGATGATCA 41
BSNT_05294___ 51 AGTTCTTCTGCTTCAAAAGCCGAGACGCGGCTGGTGGGTCGCGCCGGGCG 100
.|||||.||.||.||||||||||||||.|||||||||||||||||.||||
RBAM_032000__ 42 GGTTCTCCTTCTCCAAAAGCCGAGACGGGGCTGGTGGGTCGCGCCCGGCG 91
BSNT_05294___ 101 GCAAGATGGAGAGCGGAGAATCAGTCAGAGACTCCGTCATCAGAGAGTAC 150
|.||||||||.|||||.|||||.||||||||.|||||.||||||||||||
RBAM_032000__ 92 GGAAGATGGAAAGCGGCGAATCCGTCAGAGATTCCGTAATCAGAGAGTAC 141
BSNT_05294___ 151 AGAGAAGAGACTGGTATCTATATCATAAATCCTCAATTAAAAGGCGTTTT 200
|||||||||||.||.||.|||||..|||||||.||.|||||||||||.||
RBAM_032000__ 142 AGAGAAGAGACGGGCATTTATATATTAAATCCGCAGTTAAAAGGCGTGTT 191
BSNT_05294___ 201 TACCTTTATTATTAAAG-ACGGTGACCACATTGTCTCCGAGTGGATGATG 249
|||||||||||||||.| ||.| ||.||.||.||.||.||||||||||||
RBAM_032000__ 192 TACCTTTATTATTAAGGAACAG-GAACAAATCGTGTCAGAGTGGATGATG 240
BSNT_05294___ 250 TTTACGTTTGTCGCTGATTCATATACAGGACAAAATGTATCAGAATCGGA 299
|||||.||.|||||.||.||.||.||.||.|.||||||..|.|||||.||
RBAM_032000__ 241 TTTACTTTCGTCGCCGACTCGTACACGGGGCGAAATGTCGCTGAATCAGA 290
BSNT_05294___ 300 GGAAGGGAAACTGCAGTGGCACGATGTCAATGACATTCAGAACCTGCCTA 349
||||||....|||.|||||||.||.||.||.||.||.||.|.|||.||.|
RBAM_032000__ 291 GGAAGGCGTTCTGAAGTGGCATGACGTAAAAGATATCCACAGCCTTCCGA 340
BSNT_05294___ 350 TGGCCCCTGGAGACGGCCATATCCTTGATTTTATGATGAAGGGACAAGGG 399
|||||||.||||||||.||||||||||||||||||||.|||||.||||||
RBAM_032000__ 341 TGGCCCCCGGAGACGGGCATATCCTTGATTTTATGATCAAGGGCCAAGGG 390
BSNT_05294___ 400 CTGCTGCACGGCACATTTACGTATACACCGGACTTTGAGCTGCTCAGTTA 449
||..||||||||||.|||||||||||.||||||||.|||||||||||.||
RBAM_032000__ 391 CTTTTGCACGGCACCTTTACGTATACGCCGGACTTCGAGCTGCTCAGCTA 440
BSNT_05294___ 450 TCGTTTAGACCCGCAGCACATCAAATAG 477
|||||||||.|||||||..||||||||.
RBAM_032000__ 441 TCGTTTAGATCCGCAGCTTATCAAATAA 468
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.