Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05393 and RBAM_032630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:52
# Commandline: needle
# -asequence dna-align/BSNT_05393___yviA.1.9828.seq
# -bsequence dna-align/RBAM_032630___yviA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05393___yviA-RBAM_032630___yviA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05393___yviA-RBAM_032630___yviA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05393___yviA
# 2: RBAM_032630___yviA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 853
# Identity: 667/853 (78.2%)
# Similarity: 667/853 (78.2%)
# Gaps: 11/853 ( 1.3%)
# Score: 2563.0
#
#
#=======================================
BSNT_05393___ 1 ATGAATATTGCAGTCGTAACAGACAGCACGGCATATATTCCGAAAGAAAT 50
|||||.||||||||.|||||||||||.||.|||||||||||||||||.||
RBAM_032630__ 1 ATGAAGATTGCAGTTGTAACAGACAGTACAGCATATATTCCGAAAGAGAT 50
BSNT_05393___ 51 ACGTGAACAACATCAGATACATATGATCCCTCTCCAGGTTGTTTTTAGGG 100
..|.|||.|||||||.||.|||||||||||||||||.||.|||||..|.|
RBAM_032630__ 51 GAGAGAAGAACATCATATTCATATGATCCCTCTCCAAGTGGTTTTCGGTG 100
BSNT_05393___ 101 AGGAGACTTACCGTGAAGAAATTGAGTTGGACTGGAAAAGCTTTTACGAA 150
|..|.||.|.|||.|||||||..||..|.|||||||.|||.|||||..||
RBAM_032630__ 101 AAAAAACATTCCGCGAAGAAACAGAACTCGACTGGAGAAGTTTTTATAAA 150
BSNT_05393___ 151 GAAGTGAAAAAACATAATGAGCTCCCGACGACTTCTCAGCCGCCAATCGG 200
|||||.|||||.|||.|||||||.|||||.||.||||||||..|..||||
RBAM_032630__ 151 GAAGTAAAAAATCATGATGAGCTGCCGACTACGTCTCAGCCTTCTTTCGG 200
BSNT_05393___ 201 CGAGCTGGTTGCGTTGTATGAAGAGCTTGGCAAGTCTTATGATGCGGTTA 250
.||..|..|.||.|||||.|||||.||.|||||..|.||||||||.||.|
RBAM_032630__ 201 TGAATTAATCGCATTGTACGAAGAACTGGGCAAAACATATGATGCAGTCA 250
BSNT_05393___ 251 TCAGTATCCATCTTTCCAGCGGGATCAGCGGAACATTCAGCAGTGCAGCA 300
|.||.||.|||.|.||||||||.|||||||||||||..|.|||.||.||.
RBAM_032630__ 251 TAAGCATACATTTGTCCAGCGGAATCAGCGGAACATATAACAGCGCCGCC 300
BSNT_05393___ 301 GCGGCTGATTCGATGGTCGACAATATTGATGTGTATCCATTTGACTCAGA 350
.||||..|..|.|||||.||..|||||.|.||.|||||.|||||.|||||
RBAM_032630__ 301 TCGGCAAACACTATGGTTGATCATATTAAAGTTTATCCCTTTGATTCAGA 350
BSNT_05393___ 351 GATCAGCTGCTTGGCTCAAGGCTTTTATGCCCTTAAA-GCTGCTGAATTA 399
|||||||||.|||||.|||||.||||||| |.||||| ||.||..|..|.
RBAM_032630__ 351 GATCAGCTGTTTGGCACAAGGTTTTTATG-CATTAAAGGCAGCACAGCTC 399
BSNT_05393___ 400 ATCAAAAACGGAGCATCA-TCGCCGGAAGATATTATAAAAGAACTGGAAG 448
||.|||.||||.| .|.| ||.||||||||.|||||||||||.|||||||
RBAM_032630__ 400 ATTAAAGACGGTG-TTGACTCACCGGAAGAGATTATAAAAGAGCTGGAAG 448
BSNT_05393___ 449 AAATGAAAAAAACAGTTCGAGCTTATTTTATGGTAGATGACTTAGCTCAT 498
||||||||||||||||.||.||.|||||||||||.||.||.|||.|.||.
RBAM_032630__ 449 AAATGAAAAAAACAGTCCGTGCGTATTTTATGGTGGACGATTTATCACAC 498
BSNT_05393___ 499 CTTCAGCGCGGCGGGCGATTAAGCAGCGCCCAAGCCTTCATTGGTAGTCT 548
||.|||||.||||||||..|||||||.||.||.||.||.||.||..||||
RBAM_032630__ 499 CTCCAGCGGGGCGGGCGTCTAAGCAGTGCTCAGGCTTTTATCGGCGGTCT 548
BSNT_05393___ 549 TCTAAAGGTAAAGCCTATCCTTCATTTTGACAATAAGGTAATTGTGCCTT 598
..||||||||||||||||.||||||||||||||||||||||||||.||||
RBAM_032630__ 549 GTTAAAGGTAAAGCCTATTCTTCATTTTGACAATAAGGTAATTGTTCCTT 598
BSNT_05393___ 599 TTGAGAAGATTCGCACACGTAAAAAAGCAATTTCGCGAATTTATGAGCTT 648
|||||||||||||.|||||.||||||||.||||||.||||||.||||||.
RBAM_032630__ 599 TTGAGAAGATTCGGACACGCAAAAAAGCGATTTCGAGAATTTTTGAGCTG 648
BSNT_05393___ 649 TTAGACGAAGATGCGAGTAAAGGGTTGCCTATGCGAGCTGCTGTTATCCA 698
||.|..||.|||||.||||||||..|.||.|||||.||.|||||.|||||
RBAM_032630__ 649 TTTGGGGAGGATGCAAGTAAAGGAATCCCGATGCGGGCCGCTGTCATCCA 698
BSNT_05393___ 699 CGCTAATCGAGAGGAAGAAGCAGCGAAAATCATTGAAGAGCTTTCTGC-- 746
.||.||..|.||.||||||||.|||.|.||.||..|.||| ||..||
RBAM_032630__ 699 TGCAAACAGGGAAGAAGAAGCGGCGGATATTATACAGGAG--TTAAGCGG 746
BSNT_05393___ 747 AAAATATCCTCATGTTGAATTTTATAACAGCTATTTTGGCGCGGTAATCG 796
.||||||||||||||.|||||.||||||||||||||.||.||.||.||||
RBAM_032630__ 747 TAAATATCCTCATGTCGAATTCTATAACAGCTATTTCGGTGCCGTGATCG 796
BSNT_05393___ 797 GCACTCATTTGGGTGAAGGTGCGTTAGGAATTTGCTGGTGTTTTAAA--- 843
|.||.||||||||.|||||.||..|.|||||..|||||||.||||||
RBAM_032630__ 797 GAACCCATTTGGGCGAAGGCGCCATCGGAATCGGCTGGTGCTTTAAAAAC 846
BSNT_05393___ 844 TAA 846
|||
RBAM_032630__ 847 TAA 849
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