Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05415 and RBAM_032720
See
Amino acid alignment /
Visit
BSNT_05415 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:53
# Commandline: needle
# -asequence dna-align/BSNT_05415___tuaE.1.9828.seq
# -bsequence dna-align/RBAM_032720___tuaE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05415___tuaE-RBAM_032720___tuaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05415___tuaE-RBAM_032720___tuaE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05415___tuaE
# 2: RBAM_032720___tuaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1625
# Identity: 982/1625 (60.4%)
# Similarity: 982/1625 (60.4%)
# Gaps: 307/1625 (18.9%)
# Score: 2633.5
#
#
#=======================================
BSNT_05415___ 1 ATGAGTCTCAAACGTTCCGCGGTCA-ATGTTCTGGTTTGGCTCGCCG--- 46
.|||||.||||||||||..||| || |||||||.||...|||.||||
RBAM_032720__ 1 GTGAGTATCAAACGTTCAACGG-CACATGTTCTTGTGCTGCTTGCCGCTC 49
BSNT_05415___ 47 -CATTGACCGCAGGGTT-AGCATGCATTGTATTGGC-------------- 80
|||| ||.|.|||.|| |.||||| ||.| |||
RBAM_032720__ 50 TCATT-ACAGGAGGATTCATCATGC--TGGA--GGCGGTCAGGACGGATG 94
BSNT_05415___ 81 CC--AATCCAATGCAAAAAAAATCTTGCT--AGCATGTC----TAATTAT 122
|| |.|| |.|||||..|.|.|||| .||.||.| |.||...
RBAM_032720__ 95 CCGGATTC----GGAAAAATCACCGTGCTGCTGCTTGCCGCCATGATCGG 140
BSNT_05415___ 123 GATTGCACTGACTTCGATCGTTGTGCT-----------CAGGAA---GT- 157
.||||| |.||||| |.|.|||| ||..|| ||
RBAM_032720__ 141 TATTGC-CGGACTT-----GCTTTGCTATCCGCCTTTACAACAAACGGTC 184
BSNT_05415___ 158 ATATGTCATCTGAGCAATTGCTAATGCCCGTATTATATTTGCTGATCGC- 206
|.|||| .|.||.| |||.|| ||||| |.||||||||
RBAM_032720__ 185 AGATGT-TTATGGG-----GCTCAT-------TTATA--TCCTGATCGCG 219
BSNT_05415___ 207 TGCA-ACTTTTGCCAACAATGCTTTTTTTACGATTAAATTGGGCTTTTTC 255
||.| |.|||| .|||.|.||.||.|||.||.|..|..|.||.||||||
RBAM_032720__ 220 TGTACATTTTT--AAACCAGGCCTTCTTTGCGGTCCATCTCGGATTTTTC 267
BSNT_05415___ 256 AGCCTGTTTCCATATCG-----AATTCTTCTGATTCTGGCAGG----ATT 296
|||.|.|||..|||.|| .|||..||.|| ||||| .||
RBAM_032720__ 268 AGCTTATTTATATACCGGCTGTTATTAATCGGA-----GCAGGCGCCCTT 312
BSNT_05415___ 297 CATATTCATAGCAGAAATGTTGAAAGGCAGCCGACACCTTGAAAAGTGGA 346
|| |.|.||.|..||..|||.|..|.|||..||..||||.|..||||
RBAM_032720__ 313 CA----CGTCGCCGGCATCCTGACAAACCGCCATCATATTGACAGATGGA 358
BSNT_05415___ 347 ATCAGGTGCGTGTCAAAGGCATACTAATGTTTTTCGCATTTTGGT----- 391
|||.||||..|||.|||||..|.||.|||||||||||.||.||||
RBAM_032720__ 359 ATCGGGTGAATGTAAAAGGGGTTCTGATGTTTTTCGCCTTATGGTTTACA 408
BSNT_05415___ 392 -----TCTGTTATGGAATGATTTCACTGCTTTGGGTCAAATCTGTTACTG 436
|||..|||.| |.|| |.||||..|||||.||.||..
RBAM_032720__ 409 TACGGTCTCCTATCG--TTAT--------TGTGGGCAAAATCCGTGACGT 448
BSNT_05415___ 437 ATGGCATAAAATA--TATGTTCCTATTGGCAATGGGAATGTTCTTCGTTT 484
|.||.||.||||| ||..|| ||.|||.||||||.|||||..|..|||
RBAM_032720__ 449 ACGGGATTAAATATTTAGCTT--TAATGGGAATGGGCATGTTTCTGATTT 496
BSNT_05415___ 485 TTCTGATTGTCATGTTTTTTCAAAAATTGGATC-GC--AT--TTTCGCAT 529
.|||.|||||||||||..||||....||.|||| || || || |
RBAM_032720__ 497 ATCTTATTGTCATGTTCATTCAGCGCTTTGATCAGCTGATGGTT-----T 541
BSNT_05415___ 530 TTTATTACATATGGCTGGTCATGACCGTATTTGTAATGGGGATAGGGTTT 579
||||...|||||||||.||.||||||.|.|||||.||||.|||.||.|||
RBAM_032720__ 542 TTTACGGCATATGGCTTGTGATGACCATTTTTGTGATGGCGATCGGCTTT 591
BSNT_05415___ 580 TACAATCACTTTACATTCAACCACCTGCCGAGCTCGACCCTTTACAACGG 629
|||||.||.||||||..|.||||.|||||||||||.||.|||||.|.|||
RBAM_032720__ 592 TACAACCATTTTACACACCACCATCTGCCGAGCTCCACGCTTTATAGCGG 641
BSNT_05415___ 630 GCCGCACTATAAACAGCACTATCCGACATCCGTTTTTTTCAATCAAAATG 679
.|||||.||.||||||||.||||||||.||||||||.||.||||||||||
RBAM_032720__ 642 CCCGCAGTACAAACAGCATTATCCGACGTCCGTTTTCTTTAATCAAAATG 691
BSNT_05415___ 680 ACTTTGCGACATTTCTGTCCATCAGCTTTTGCTTTTATTTATCTTTTT-- 727
|.||.||.||.|||.|||.|||||| |||.|| |||.|.|
RBAM_032720__ 692 ATTTCGCAACGTTTTTGTGCATCAG--------TTTCTT--TCTGTATGC 731
BSNT_05415___ 728 --------TCAAAAACATTAAAAACAGCTATTTAAAAATAGCAG---GAT 766
|.|||||.||.||||||.|||||.|.|| .||.| |..
RBAM_032720__ 732 GGCGGCGGTGAAAAATATGAAAAACGGCTATGTGAA---GGCCGTCAGCC 778
BSNT_05415___ 767 TGATCCTTGCGTTCTG---TTCGGCCTACTTGATTTTTCTGACTGGATCA 813
||.||.|||||.|||| ||.| ||.||.||..||.||||.||.||.
RBAM_032720__ 779 TGCTCTTTGCGATCTGCGCTTTG---TATTTAATCATTTTGACCGGTTCG 825
BSNT_05415___ 814 AGAGCCAGTATCCTAGGAGTTATA---GCCGGACTTGCCG--TTTATACG 858
.|.||.|||.|.||.|| .||| ||.|| |.|| |.||||||
RBAM_032720__ 826 CGCGCGAGTCTGCTGGG---CATATGCGCGGG----GGCGGCTGTATACG 868
BSNT_05415___ 859 --TTCATTTTGCTGCCGAAGATGCTTAAAAAATGGGCGCTCATCGCCGC- 905
|||||..|||||||.....||.|.||||||...|||||...|||.||
RBAM_032720__ 869 TCTTCATCCTGCTGCCTTCCCTGTTGAAAAAACTCGCGCTGTACGCAGCG 918
BSNT_05415___ 906 --AGC---TGCAG-GATGTAT-CGCTTTTGTCACCCTGTTTGCAGGAAAG 948
||| |||.| |.|||.| ||.||| |.|||||.||....
RBAM_032720__ 919 GGAGCGGGTGCGGCGCTGTGTGCGGTTT--------TATTTGCGGGCCGT 960
BSNT_05415___ 949 ATTAC-----------TGGAGCTTTTTATACATACTTTTTAGCTCCGCAA 987
||.|| ||.|.|| .||||.|||||||||.
RBAM_032720__ 961 ATCACCAACGCCGTCTTGAATCT-----------GTTTTCAGCTCCGCAG 999
BSNT_05415___ 988 ACAATACAC--GATTTCAGCGAGCCGCTGCCATCCAATGTAGGGAGGGC- 1034
.|.||.| | || |||| |.|||||.||.|||||..|.|.||||||
RBAM_032720__ 1000 GCGATGC-CGGGA---CAGC-AACCGCTTCCTTCCAACCTCGCGAGGGCG 1044
BSNT_05415___ 1035 AAACTTGTTGAAAAACGCCGGCCATTATGTGCTGGATACTTACGGATTTG 1084
||.||| ||.|||||||||...||.||||||.|.|||.|.|..||.||.|
RBAM_032720__ 1045 AATCTT-TTAAAAAACGCCTTTCACTATGTGATTGATTCCTGGGGGTTCG 1093
BSNT_05415___ 1085 GCGTTGGCGCAGGCAATGTACCTTATTATTT------GGAACATCATGCA 1128
|.||.||.||.||.||.||..||||.||||| |||.|
RBAM_032720__ 1094 GAGTGGGTGCCGGAAACGTCTCTTACTATTTAAAAGCGGAGC-------- 1135
BSNT_05415___ 1129 CTGTT--CGATACGGATCAG-GTCGTCGAGGTTCATAACTGGCTCGTTGA 1175
|.||| .||||||| .|.| ||.||.|||||.||.|||||||||||.||
RBAM_032720__ 1136 CCGTTTATGATACGG-GCGGCGTAGTTGAGGTGCACAACTGGCTCGTCGA 1184
BSNT_05415___ 1176 GATCATGACGAACTTTGGAGTTGTGATGATGCTCGGTTATTTAACAATGT 1225
|||.|||.|||||||.||.|||.|.|.||||||||||||..|.|||.|.|
RBAM_032720__ 1185 GATTATGGCGAACTTCGGCGTTCTTACGATGCTCGGTTACCTGACAGTCT 1234
BSNT_05415___ 1226 A-------CATTT------ATTTAATAACTGTGCTTTACCGGTATTATAA 1262
| |.||| |.||.||||.||| .||.|.|.
RBAM_032720__ 1235 ATTTGTTCCTTTTTTGGACACTTTATAAATGT----------CATGAAAG 1274
BSNT_05415___ 1263 AAGATCGCTTGGAAGGCGGCCAAAGCTTCTCATTGAAGG-TTTGACAGCC 1311
||.|||| |.||..|.|.|||..||..|||..||||| .||..|| |.
RBAM_032720__ 1275 AAAATCG---GAAAATCAGTCAAGACTGATCACAGAAGGACTTATCA-CG 1320
BSNT_05415___ 1312 GCGCTTGTCGCTTTCCTTGTGTCA--AGTATCAGCCCGAGTTCCGTTTCG 1359
|||.|.|.||.||| ||..||.| ||.||||||||.||.|||||.||.
RBAM_032720__ 1321 GCGATGGCCGGTTT--TTTGGTAAGCAGCATCAGCCCAAGCTCCGTATCA 1368
BSNT_05415___ 1360 AATTTATACTTCCATTGGGTGTTTCTCGCCCTTGTTATAGCGGC------ 1403
|||||||..|||||.|||||.||||||.|.||.||.||.|||||
RBAM_032720__ 1369 AATTTATTTTTCCACTGGGTATTTCTCTCGCTCGTGATCGCGGCGGTCAA 1418
BSNT_05415___ 1404 --AATTAACACTTTTAGAA-------------TCA--GCGGAACAGATGA 1436
.|||.|..|.||||.|| ||| |||.| ..||||
RBAM_032720__ 1419 TATATTGAGGCGTTTACAAAAGGAGCCTGCCGTCACGGCGTA--CTATGA 1466
BSNT_05415___ 1437 AACCGAACAG---TAT---AGATAA 1455
|| ||||| .|| ||||.|
RBAM_032720__ 1467 AA---AACAGGGAGATGCGAGATGA 1488
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.