Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05421 and RBAM_032750
See
Amino acid alignment /
Visit
BSNT_05421 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:53
# Commandline: needle
# -asequence dna-align/BSNT_05421___tuaB.1.9828.seq
# -bsequence dna-align/RBAM_032750___tuaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05421___tuaB-RBAM_032750___tuaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05421___tuaB-RBAM_032750___tuaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05421___tuaB
# 2: RBAM_032750___tuaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1542
# Identity: 1002/1542 (65.0%)
# Similarity: 1002/1542 (65.0%)
# Gaps: 195/1542 (12.6%)
# Score: 3073.0
#
#
#=======================================
BSNT_05421___ 1 ATGTCTACCATTACGAAACAAATATTAAGCGGTGCAAAATGGACAAGTGT 50
|||.|||..|||||.||.|||||.||.|||||.||.||||||||||||.|
RBAM_032750__ 1 ATGCCTAGTATTACAAATCAAATCTTGAGCGGCGCCAAATGGACAAGTAT 50
BSNT_05421___ 51 TTCAACCTTGATCG----TCACGGTTATTCAAATTATACAGTTTGCACTG 96
|||.|| |.|| |.|||||.||||||||.||.||.||.||.|||
RBAM_032750__ 51 TTCGAC----AGCGTGTATTACGGTCATTCAAATCATCCAATTCGCCCTG 96
BSNT_05421___ 97 CTCGGCAATATCATGACAATTGCTGAATTCGGTTTGGTCGGGATGCTGAC 146
|||||.....|||||.||.|.|||||||||||..|.|||||.|||.|.||
RBAM_032750__ 97 CTCGGGCGGGTCATGTCACTGGCTGAATTCGGCCTTGTCGGCATGATCAC 146
BSNT_05421___ 147 CACTGT--TACTATTTTCACACAAATTGTACTCGATATGGGATTTGGAGC 194
.||.|| |..|.||| .|.|||||||..||.||||||||.|||||.||
RBAM_032750__ 147 AACGGTAGTGGTGTTT--GCCCAAATTGCGCTTGATATGGGTTTTGGCGC 194
BSNT_05421___ 195 CGCTTTAATTCAAAAGGAGAATATCAGTGAACGCCAATTATCTACTTTGT 244
|||..|.||||||||.||..||.|.|.|||....||..|.|||.|.||||
RBAM_032750__ 195 CGCGCTCATTCAAAAAGATCATGTGACTGATAAACAGATGTCTTCCTTGT 244
BSNT_05421___ 245 ATTGGCTGAATATCTTAACAGGTATCCTT---TTGTTTATCGGC----CT 287
|.||||||||||||.||||||| .||| .||||| || ||
RBAM_032750__ 245 ACTGGCTGAATATCATAACAGG---GCTTGCGCTGTTT----GCGCTGCT 287
BSNT_05421___ 288 GTTTTGCCTGAGTCCCTTTATCGCAGACTTTTATCAGCGTGACGAACTGG 337
|||||.|...|||||..|.|||||.||.|||||||.|||.||.||.||.|
RBAM_032750__ 288 GTTTTTCAGCAGTCCGCTCATCGCCGATTTTTATCGGCGGGAGGAGCTTG 337
BSNT_05421___ 338 TTTTTCTT-------GTGCGGATTTTGGCCGGCATGTTTTTAATCGCCCC 380
|.|.| || |||| ||||||.|||||||||||||||.||
RBAM_032750__ 338 TCTAT-TTAATCCGCGTGC------TGGCCGTCATGTTTTTAATCGCGCC 380
BSNT_05421___ 381 GGTCGGGCAGCAGTATCAATATATGCTGCAAAAAGAACTGAAGTTCAATG 430
|.||||.|||||.||.||.||||||||||||||||..|||...||.||..
RBAM_032750__ 381 GATCGGTCAGCAATACCAGTATATGCTGCAAAAAGCGCTGGCATTTAACA 430
BSNT_05421___ 431 TGTTGAGCAAAATAGAAGCCGGGGTCACCATTTTGTCATTTGTGC--TCC 478
.|||.|||||.||.||| ||.||.|||..||||| |||
RBAM_032750__ 431 CGTTAAGCAAGATTGAA------------ATCTTTTCAAATGTGCTGTCC 468
BSNT_05421___ 479 TGCTCGT---TTTGG----------TTTTTCTGATGGATCCAATTGTGGC 515
| |||| ||||| |||||.| |.|||.||.|||.|.||
RBAM_032750__ 469 T--TCGTGTATTTGGCGGCCGCGGTTTTTTAT-ACGGACCCGATTCTCGC 515
BSNT_05421___ 516 CTATGCATTTTCACAAGTTTTTCTTAATTCGGTTAAAGGCATCTTGTTTT 565
|||||...||||.||.||..|.||..|.|||...||||||| ||.|
RBAM_032750__ 516 CTATGTGATTTCCCAGGTGCTGCTGCAATCGTCAAAAGGCA-----TTCT 560
BSNT_05421___ 566 TTGCTGTATATTTT-----AAAAAATGGCGTCCTTCTTTTGTCTTTGCA- 609
.|.|||.||.|..| ||||.||||.|.||..|.||.||.|||| |
RBAM_032750__ 561 GTACTGGATGTCCTGCAGAAAAACATGGAGACCGGCGTTCGTTTTTG-AT 609
BSNT_05421___ 610 -TTAGGGGAAGTGAAAGAATTTTTCTCTTTCGGCGCATTTCAGCTTGCTT 658
|.|..|||| ||||||..||.||.||||||||.||.||||||||..|||
RBAM_032750__ 610 CTGAAAGGAA-TGAAAGGCTTCTTTTCTTTCGGGGCCTTTCAGCTGTCTT 658
BSNT_05421___ 659 CCAGGCTTGTAAACAGACTTGGCGCCAATATCGACATGATTTTGATCGGA 708
||.|||||||.|||.|.||.||.||.|||||.||.||||||.|||||||.
RBAM_032750__ 659 CCCGGCTTGTGAACCGGCTCGGAGCGAATATTGATATGATTCTGATCGGC 708
BSNT_05421___ 709 CGGTTTCTCGGTGCGGAAGCTTTGGGAATCTATAACCTAGCTTATCAGAT 758
.|.|||.||||.||.||.||..|.||.||.||.||.||.||.||.|||||
RBAM_032750__ 709 AGTTTTATCGGCGCTGAGGCGCTCGGCATTTACAATCTGGCCTACCAGAT 758
BSNT_05421___ 759 TATTACGATTCCCGTGTTAAAAATCAACCCGATCGTGACACGGGTAGCGT 808
|.|.|||.||||.||.||||||||.||.||||||.|.||..|.||.||||
RBAM_032750__ 759 TGTCACGCTTCCGGTATTAAAAATTAATCCGATCATTACGAGAGTCGCGT 808
BSNT_05421___ 809 TTCCTGTCTTCTCAAAAAATAAGGGAGATAACCGAACG--CTGCGCGAAG 856
||||.|||||..|.|||||.|||...||.||| |.|| .|..|.||||
RBAM_032750__ 809 TTCCCGTCTTTGCGAAAAACAAGCATGAAAAC--AGCGTTATCAGAGAAG 856
BSNT_05421___ 857 GTTTTTTAAATATGACAAAGCTTCTCGCACTGATTTCATTCCCGCTTCTG 906
|.|||.|.||||||||.||..|.|||||.|||||.||.||.||||||.||
RBAM_032750__ 857 GATTTCTCAATATGACCAAAATACTCGCGCTGATATCCTTTCCGCTTTTG 906
BSNT_05421___ 907 ATCGGACTGATGACTGTTTCAGATTTATTTATTGAAGTCGC------CTT 950
.||||..||.|..|.||.||.|||..||| .||.|| .||
RBAM_032750__ 907 CTCGGTTTGGTTTCAGTGTCGGATGCATT------CGTGGCTTCGGTATT 950
BSNT_05421___ 951 CGGAGAAAAATGGCTGCAGGCTGTACCAGTTCTGAACATCCTCGCGATTG 1000
||||||||||||||||..||||||.||.|||.|.|||.|.|||||.||.|
RBAM_032750__ 951 CGGAGAAAAATGGCTGGCGGCTGTCCCGGTTTTAAACGTTCTCGCCATCG 1000
BSNT_05421___ 1001 TCGGACTCCTCAGGGTTCTGATGAATCCGAACGGATCGGTTTTGCTGGCG 1050
||||..|..|.||||||||||||||||||||||||||.||..||||.||.
RBAM_032750__ 1001 TCGGGATATTAAGGGTTCTGATGAATCCGAACGGATCTGTGCTGCTCGCA 1050
BSNT_05421___ 1051 AAGGGGAGAGCAGACCTGGCATTTTATTGGGACAGCGGGATCATGCTCCT 1100
||.|||.|.||.||.|||||.||||||||||||..||||.|.|||||.||
RBAM_032750__ 1051 AAAGGGCGGGCCGATCTGGCGTTTTATTGGGACGCCGGGGTGATGCTGCT 1100
BSNT_05421___ 1101 TTATGGGCTGTCA-CTT--TATGCGGCGGTACTAAC--GAATGAT---TT 1142
.||||| || || ||| ||.||.||.||.||..| ||| || ||
RBAM_032750__ 1101 GTATGG--TG-CATCTTTGTACGCCGCCGTGCTGTCCGGAA--ATCTCTT 1145
BSNT_05421___ 1143 GACG--ACCACCGCCTGGACATATGCAGCGATCAGCCTGATTAATTTCTT 1190
|||| | ||||||||.||.||....||||||.|..|.||||||.|
RBAM_032750__ 1146 GACGGTA-----GCCTGGACGTACGCTTTCATCAGCATCCTGAATTTCCT 1190
BSNT_05421___ 1191 TATTGGCAGATGGCTGCTCAAATATGTCATTCAGCTGAAGCTG--GGCGT 1238
.||.||..|.||||||.|...||||||||||.|||||..|||| |||.|
RBAM_032750__ 1191 GATCGGGCGCTGGCTGTTGGCATATGTCATTAAGCTGCGGCTGTCGGCTT 1240
BSNT_05421___ 1239 ATATTTTCGAA-CCGTTGGAAAACCGCTCACCTTGACGCTGCTTATGGCA 1287
| .|||.|| ||||.|..||||||.| .|||||||.|||
RBAM_032750__ 1241 A---CTTCAAAGCCGTGGCCAAACCGTT---------TCTGCTTACGGC- 1277
BSNT_05421___ 1288 TTGCTGGC---GCTTGTCTTGAGCGTTGGCAGCAGACATCTGCTTCACGG 1334
||| |..||||.| .||.||..|||| ||.||.|..|||||
RBAM_032750__ 1278 -----GGCAATGGGTGTCAT-CGCCTTTACAGC---CAGCTTCGGCACGG 1318
BSNT_05421___ 1335 CGC----------------CATGCTTCAGCTGACAGTTTCAGT------C 1362
.|| ||.|||.|.||||.|..|.||.|| |
RBAM_032750__ 1319 AGCGGATCAGCCTTGATGTCAAGCTGCGGCTGGCGATCTCCGTAGCCTGC 1368
BSNT_05421___ 1363 GGGATAAGCGGGATTTTTTACGTTTTTT--TGGTCAGCAAATTATATCGG 1410
| |||.|.|.|.||| |||.|| ||.|..|.|||...||||.|
RBAM_032750__ 1369 G------GCGCGTTGTGTTA--TTTATTCCTGTTAGGAAAAGCTTATCCG 1410
BSNT_05421___ 1411 CGGGCTATGAGGGCCCAATTAGGAAGATGA------------ 1440
| .|||||......|||||.|||.|.||
RBAM_032750__ 1411 C---ATATGAAAAGTAAATTAAGAAAAGGACGTTTGCTATGA 1449
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.