Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05560 and RBAM_033610

See Amino acid alignment / Visit BSNT_05560 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:02
# Commandline: needle
#    -asequence dna-align/BSNT_05560___mbl.1.9828.seq
#    -bsequence dna-align/RBAM_033610___mbl.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05560___mbl-RBAM_033610___mbl.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05560___mbl-RBAM_033610___mbl.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05560___mbl
# 2: RBAM_033610___mbl
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity:     898/1002 (89.6%)
# Similarity:   898/1002 (89.6%)
# Gaps:           0/1002 ( 0.0%)
# Score: 4074.0
# 
#
#=======================================

BSNT_05560___      1 ATGTTTGCAAGGGATATTGGTATTGACCTCGGTACTGCAAATGTACTGAT     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_033610__      1 ATGTTTGCAAGGGATATTGGAATTGACCTCGGTACTGCAAATGTACTGAT     50

BSNT_05560___     51 CCATGTTAAAGGTAAAGGAATTGTTCTGAATGAACCTTCCGTTGTTGCAC    100
                     ||||||.|||||.||||||||||||||||||||.|||||||||||.||||
RBAM_033610__     51 CCATGTAAAAGGAAAAGGAATTGTTCTGAATGAGCCTTCCGTTGTGGCAC    100

BSNT_05560___    101 TTGATAAAAACAGCGGCAAAGTGCTGGCGGTTGGCGAAGAGGCAAGACGA    150
                     ||||||||||||||||||||||||||||.||.||.|||||.||.||||||
RBAM_033610__    101 TTGATAAAAACAGCGGCAAAGTGCTGGCTGTCGGTGAAGAAGCCAGACGA    150

BSNT_05560___    151 ATGGTTGGACGTACACCTGGGAATATTGTTGCGATTCGCCCGCTGAAAGA    200
                     |||||||||||||||||||||||||||||||||||.||.|||||||||||
RBAM_033610__    151 ATGGTTGGACGTACACCTGGGAATATTGTTGCGATCCGTCCGCTGAAAGA    200

BSNT_05560___    201 CGGAGTTATTGCTGACTTTGAAGTAACAGAAGCAATGCTGAAACATTTTA    250
                     |||.||.||.||.|||||.||||||||||||||.||||||||||||||.|
RBAM_033610__    201 CGGCGTAATCGCAGACTTCGAAGTAACAGAAGCCATGCTGAAACATTTCA    250

BSNT_05560___    251 TTAACAAGCTGAATGTAAAAGGCCTGTTCTCAAAGCCGCGCATGCTCATT    300
                     ||||.|||||||||||||||||.||.||||||||.|||||||||||.||.
RBAM_033610__    251 TTAATAAGCTGAATGTAAAAGGACTTTTCTCAAAACCGCGCATGCTGATC    300

BSNT_05560___    301 TGCTGCCCGACGAATATTACATCCGTTGAGCAAAAAGCAATTAAAGAAGC    350
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
RBAM_033610__    301 TGCTGCCCGACGAATATTACATCCGTTGAGCAAAAAGCGATTAAAGAAGC    350

BSNT_05560___    351 TGCAGAAAAAAGCGGCGGGAAACATGTGTACCTTGAAGAAGAACCTAAAG    400
                     .||.||||||||||||||.||.|||||||||||||||||||||||.||||
RBAM_033610__    351 AGCTGAAAAAAGCGGCGGAAAGCATGTGTACCTTGAAGAAGAACCGAAAG    400

BSNT_05560___    401 TTGCCGCTATCGGCGCGGGTATGGAAATATTCCAGCCAAGCGGTAACATG    450
                     ||||||||||||||||||||||||||||.||||||||.||||||||||||
RBAM_033610__    401 TTGCCGCTATCGGCGCGGGTATGGAAATCTTCCAGCCGAGCGGTAACATG    450

BSNT_05560___    451 GTTGTAGACATCGGAGGCGGGACGACGGATATCGCGGTTATTTCAATGGG    500
                     |||||.||||||||||||||.|||||.||||||||.||||||||.|||||
RBAM_033610__    451 GTTGTTGACATCGGAGGCGGTACGACAGATATCGCAGTTATTTCTATGGG    500

BSNT_05560___    501 CGATATTGTCACCTCCTCTTCTATTAAAATGGCTGGGGACAAGTTTGACA    550
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
RBAM_033610__    501 CGATATTGTCACCTCCTCTTCTATTAAGATGGCTGGGGACAAGTTTGACA    550

BSNT_05560___    551 TGGAAATCTTAAATTATATCAAACGCGAGTACAAGCTGCTGATCGGCGAA    600
                     |||||||||||||||||||||||||||||||.||||||||||||||.|||
RBAM_033610__    551 TGGAAATCTTAAATTATATCAAACGCGAGTATAAGCTGCTGATCGGTGAA    600

BSNT_05560___    601 CGTACTGCGGAGGATATTAAGATTAAAGTCGCAACTGTTTTCCCAGACGC    650
                     |||||.||.||.|||||||||.|.||.||||||||.||||||||||||||
RBAM_033610__    601 CGTACCGCTGAAGATATTAAGGTGAAGGTCGCAACGGTTTTCCCAGACGC    650

BSNT_05560___    651 ACGTCACGAGGAAATTTCCATTCGCGGACGGGACATGGTTTCCGGTCTTC    700
                     ||||||.||.|||||..||||.|||||.||.|||||||||||||||||.|
RBAM_033610__    651 ACGTCATGAAGAAATCACCATCCGCGGCCGTGACATGGTTTCCGGTCTGC    700

BSNT_05560___    701 CAAGAACAATTACAGTAAACAGTAAAGAAGTTGAAGAAGCCCTTCGTGAA    750
                     |.|||||.||||||||||||||.||||||||.||||||||||||||||||
RBAM_033610__    701 CGAGAACGATTACAGTAAACAGCAAAGAAGTAGAAGAAGCCCTTCGTGAA    750

BSNT_05560___    751 TCTGTCGCTGTTATTGTTCAGGCTGCGAAACAAGTGCTCGAAAGAACACC    800
                     ||.||.||.||.|||||.|||||.||.||.||.||.||.|||||||||||
RBAM_033610__    751 TCAGTTGCCGTCATTGTGCAGGCCGCCAAGCAGGTTCTTGAAAGAACACC    800

BSNT_05560___    801 GCCTGAACTTTCTGCTGATATTATTGACCGCGGCGTTATTATTACCGGCG    850
                     |||||||.|.||.|||||.||.||.||||||||||||||.||||||||||
RBAM_033610__    801 GCCTGAATTGTCCGCTGACATCATCGACCGCGGCGTTATCATTACCGGCG    850

BSNT_05560___    851 GAGGCGCGCTCTTAAACGGCCTTGACCAGCTGCTTGCTGAAGAGCTGAAG    900
                     |.||.|||||.||||||||.|||||.|||||.|||||.||||||||||.|
RBAM_033610__    851 GGGGAGCGCTGTTAAACGGGCTTGATCAGCTTCTTGCCGAAGAGCTGAGG    900

BSNT_05560___    901 GTACCGGTCCTCGTTGCTGAAAATCCTATGGATTGCGTAGCCATCGGCAC    950
                     ||.||.||.||.||||||||.||.||.||||||||.||.||..||||.||
RBAM_033610__    901 GTGCCTGTTCTTGTTGCTGAGAACCCGATGGATTGTGTTGCGGTCGGAAC    950

BSNT_05560___    951 AGGTGTCATGCTTGATAATATGGACAAGCTTCCTAAACGCAAACTAAGCT   1000
                     .||.||||||||.|||||.||||||||||||||.|||||||||||.||||
RBAM_033610__    951 CGGCGTCATGCTGGATAACATGGACAAGCTTCCAAAACGCAAACTGAGCT   1000

BSNT_05560___   1001 GA   1002
                     ||
RBAM_033610__   1001 GA   1002


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