Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05562 and RBAM_033630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:03
# Commandline: needle
# -asequence dna-align/BSNT_05562___ywoH.1.9828.seq
# -bsequence dna-align/RBAM_033630___ywoH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05562___ywoH-RBAM_033630___ywoH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05562___ywoH-RBAM_033630___ywoH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05562___ywoH
# 2: RBAM_033630___ywoH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 422
# Identity: 333/422 (78.9%)
# Similarity: 333/422 (78.9%)
# Gaps: 16/422 ( 3.8%)
# Score: 1280.0
#
#
#=======================================
BSNT_05562___ 1 ATG-TCCTACGTCAACAGACACCTCATTCATCAAATCAACCAAAGCGCCC 49
||| ||| ||||||||||||.|||||||||.||||||||.|||.||||||
RBAM_033630__ 1 ATGATCC-ACGTCAACAGACGCCTCATTCACCAAATCAATCAATGCGCCC 49
BSNT_05562___ 50 GCCTGATTGCCAAGAAAGCCAATGAACAGCTAGAGCCATTCGGCCTTTAT 99
||||||||.|.||||||||||||||||.|||.||.|||||||||||.||.
RBAM_033630__ 50 GCCTGATTACGAAGAAAGCCAATGAACGGCTGGAACCATTCGGCCTGTAC 99
BSNT_05562___ 100 TCATCCCAATGGTCAGTTTTATATTGTTTGCGTACGATCGGACCAATGAC 149
||.||.|||||||||.|..|||||||.||....|||||||||||.|||||
RBAM_033630__ 100 TCCTCTCAATGGTCAATCCTATATTGCTTAAAAACGATCGGACCGATGAC 149
BSNT_05562___ 150 TCAAAAAGAGATTTGGTCCTATTTAAATGTGGAAGCGCCGACTGTGACTC 199
.||||||||.||.|||||||||.|.|||||.||.||||||||.||.||..
RBAM_033630__ 150 CCAAAAAGAAATCTGGTCCTATCTGAATGTAGAGGCGCCGACCGTTACCA 199
BSNT_05562___ 200 GGACGATCAAACGCCTGGAGGAGAACGGCTGGGTTCAGAGACGG---CAA 246
|.||||||||||||||.||.||.|||||||||.||||| ||| ||.
RBAM_033630__ 200 GAACGATCAAACGCCTTGAAGAAAACGGCTGGATTCAG---CGGGAACAG 246
BSNT_05562___ 247 GGTGAAGACAAACGGGAAAAACTTGTTGTCCTCACAAAAGAAGCCGAGAA 296
||.||||||||.||||||||.||.||.|||||.||.||.|||||.||...
RBAM_033630__ 247 GGAGAAGACAAGCGGGAAAAGCTCGTCGTCCTGACGAAGGAAGCTGAATT 296
BSNT_05562___ 297 AAAATACGA-AGAAATCAATGTGAAAATGCTGAAATTCGAGGAAGAGCTG 345
.|||||||| || .||||||....|.||||||||.|||||||||||..||
RBAM_033630__ 297 GAAATACGACAG-CATCAATCAAGAGATGCTGAAGTTCGAGGAAGACATG 345
BSNT_05562___ 346 CTTGCTGATTTCCGGGATGAAGATAAAGAAGCTTTTTCTCATTTATTCCG 395
|||||.|||||||..||||.||||||.||||||||||||.|.| |||.|
RBAM_033630__ 346 CTTGCGGATTTCCAAGATGGAGATAAGGAAGCTTTTTCTGAGT--TTCTG 393
BSNT_05562___ 396 CATGTTTTTACAAC--AATGA- 414
.||||.|||..||| ||| |
RBAM_033630__ 394 AATGTGTTTTTAACGAAAT-AG 414
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