Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05581 and RBAM_033740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:04
# Commandline: needle
# -asequence dna-align/BSNT_05581___ywnH.1.9828.seq
# -bsequence dna-align/RBAM_033740___ywnH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05581___ywnH-RBAM_033740___ywnH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05581___ywnH-RBAM_033740___ywnH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05581___ywnH
# 2: RBAM_033740___ywnH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity: 374/511 (73.2%)
# Similarity: 374/511 (73.2%)
# Gaps: 26/511 ( 5.1%)
# Score: 1289.5
#
#
#=======================================
BSNT_05581___ 1 ATGAACATGACATTGCGCCTTGCTGAACATAG--AGACTTGGAGGCTGTT 48
|||||..||||..|||||...||.| .||.| |||.||.||.||.||.
RBAM_033740__ 1 ATGAATTTGACCCTGCGCAAAGCCG--TATTGGAAGATTTAGATGCGGTG 48
BSNT_05581___ 49 GTGGCGATTTATAATTCAACGATTGCTTCTCGAATGGTAACAGCCGATAC 98
|||||.||.||.||.||.||||||||.||.||.||||||||.||.|||||
RBAM_033740__ 49 GTGGCCATATACAACTCGACGATTGCCTCACGGATGGTAACGGCTGATAC 98
BSNT_05581___ 99 CGAACCGGTAACTCCTGAAGACCGGATGGAATGGTTTTTAGGACATACAG 148
.|||...||.||.||.|.||||||||||||.||||||||..|.||.||.|
RBAM_033740__ 99 GGAAGAAGTGACGCCCGCAGACCGGATGGATTGGTTTTTGCGGCACACGG 148
BSNT_05581___ 149 A--GGCACGTCCGCTCTAT-GTGGCCGAGGACGAAAACGGAAACGTCGCT 195
| || ||.||||| .|| ||.||.||.||.||||.|||.||.||.||.
RBAM_033740__ 149 ACCGG--CGCCCGCT-GATGGTCGCGGAAGATGAAACCGGCAAAGTGGCG 195
BSNT_05581___ 196 GCCTGGATCAGCTTTGAAACATTTTATGGAAGGCCAGCCTATAATAAAAC 245
||||||||||||||||||||.|||||.||..|.||.||||||.|.|||||
RBAM_033740__ 196 GCCTGGATCAGCTTTGAAACGTTTTACGGCCGTCCGGCCTATGACAAAAC 245
BSNT_05581___ 246 AGCGGAGGTCAGCATATA----CATTGACGAAGCA-TGCCGCGGCAAAGG 290
.||||||.|||||||.|| ||| .||.| ||||||||||||||
RBAM_033740__ 246 GGCGGAGATCAGCATCTATCTGCAT-----CAGGATTGCCGCGGCAAAGG 290
BSNT_05581___ 291 CGTTGGATCATATTTGCTTCAGGAAGCGCTCCGCA-TTGCGCCG--GATC 337
.|..|||...|.|.||||..|.|||||.|| .||| |.||.||| .|||
RBAM_033740__ 291 AGCAGGAAGCTTTCTGCTGAAAGAAGCCCT-GGCACTCGCTCCGACAATC 339
BSNT_05581___ 338 TTGGCATCCGCTCACTTATGGCCTTCATTTTCGGGCATAATAAACCAAGC 387
|||||||||...||.|||||.||.||.|||||.||||||...||.|||
RBAM_033740__ 340 --GGCATCCGCAGCCTGATGGCTTTTATCTTCGGACATAATGTGCCGAGC 387
BSNT_05581___ 388 CTGAAGCTGTTTGAAAAGCACGGGTTTGCAGAATGGGGACTATTCCCCGG 437
.|.||||||||||||||...|||.|||.|.||||||||..|||||||.||
RBAM_033740__ 388 ATTAAGCTGTTTGAAAAATTCGGTTTTACCGAATGGGGCGTATTCCCGGG 437
BSNT_05581___ 438 CATCGCCGAAATGGACGGGAAAAGATACGATTTAAAAATTTTAGGGAGAG 487
.|||||||||||||||||.|||.||||.||.||.||.|||||||||||||
RBAM_033740__ 438 TATCGCCGAAATGGACGGAAAACGATATGACTTGAACATTTTAGGGAGAG 487
BSNT_05581___ 488 AGCTTTCATGA 498
|.||.||||||
RBAM_033740__ 488 AACTGTCATGA 498
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