Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05593 and RBAM_033830

See Amino acid alignment / Visit BSNT_05593 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:05
# Commandline: needle
#    -asequence dna-align/BSNT_05593___ureA.1.9828.seq
#    -bsequence dna-align/RBAM_033830___ureA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05593___ureA-RBAM_033830___ureA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05593___ureA-RBAM_033830___ureA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05593___ureA
# 2: RBAM_033830___ureA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     260/318 (81.8%)
# Similarity:   260/318 (81.8%)
# Gaps:           0/318 ( 0.0%)
# Score: 1068.0
# 
#
#=======================================

BSNT_05593___      1 ATGAAACTGACACCGGTTGAACAAGAAAAATTGCTCATTTTTGCAGCGGG     50
                     |||||||||||||||||||||||||||||||||||.||||||.|.|||||
RBAM_033830__      1 ATGAAACTGACACCGGTTGAACAAGAAAAATTGCTTATTTTTACGGCGGG     50

BSNT_05593___     51 GGAATTAGCCAAACAGCGAAAGGCGCGGGGCGTTCTGTTGAACTATCCTG    100
                     .||..|.||.||.|||||.||||||||.|||||||||.||||.|||||.|
RBAM_033830__     51 AGAGCTCGCTAAGCAGCGGAAGGCGCGCGGCGTTCTGCTGAATTATCCCG    100

BSNT_05593___    101 AGGCTGCTGCTTATATCACCTGCTTTATTATGGAAGGCGCACGTGATGGG    150
                     |.||.||.||.|||.|.|||||||.|.|.|||||||||||..|.||.||.
RBAM_033830__    101 AAGCCGCCGCATATTTGACCTGCTATCTGATGGAAGGCGCGAGAGACGGA    150

BSNT_05593___    151 AAGGGAGTAGCAGAGCTGATGGAAGCCGGGCGCCATGTATTAACGGAAAA    200
                     ||..|.||.||.||||||||||||.||||.|||.|||||||.||||||||
RBAM_033830__    151 AAAAGCGTTGCTGAGCTGATGGAATCCGGCCGCAATGTATTGACGGAAAA    200

BSNT_05593___    201 AGATGTGATGGAAGGTGTGCCTGAGATGCTTGAAAGCATTCAGGTGGAAG    250
                     ||||||.||||||||.||.||.||.|||||.||.||||||||||||||||
RBAM_033830__    201 AGATGTTATGGAAGGCGTTCCGGAAATGCTGGACAGCATTCAGGTGGAAG    250

BSNT_05593___    251 CCACATTTCCGGATGGAGTAAAGCTTGTTACGGTACATCAGCCAATTTCT    300
                     |.||.||.|||||.||.||.||||||||.||.||.||||||||.||....
RBAM_033830__    251 CGACGTTCCCGGACGGGGTTAAGCTTGTCACCGTTCATCAGCCGATCAAA    300

BSNT_05593___    301 GCGGAGGTGAAGTCATGA    318
                     ||||||||||||||||||
RBAM_033830__    301 GCGGAGGTGAAGTCATGA    318


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