Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05618 and RBAM_033940

See Amino acid alignment / Visit BSNT_05618 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:06
# Commandline: needle
#    -asequence dna-align/BSNT_05618___ywzB.1.9828.seq
#    -bsequence dna-align/RBAM_033940___ywzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05618___ywzB-RBAM_033940___ywzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05618___ywzB-RBAM_033940___ywzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05618___ywzB
# 2: RBAM_033940___ywzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity:     179/231 (77.5%)
# Similarity:   179/231 (77.5%)
# Gaps:           0/231 ( 0.0%)
# Score: 687.0
# 
#
#=======================================

BSNT_05618___      1 ATGAGTGTATTGGGACAGCAGGCTGCAATCGGCATTGTCGTTCACCTGAT     50
                     .|||.|||||||||.||||||||.||||||.||||..|.|||||||||.|
RBAM_033940__      1 GTGAATGTATTGGGGCAGCAGGCCGCAATCAGCATCCTGGTTCACCTGGT     50

BSNT_05618___     51 TTTTATAGCAGTGACTTGGTGGGCGTTGCAAGCCGTCAATATAGATCCGT    100
                     .|..||.||.|||||.|||||||||.|.||.||||||||..|.||||||.
RBAM_033940__     51 ATGCATTGCGGTGACATGGTGGGCGCTTCAGGCCGTCAACTTTGATCCGC    100

BSNT_05618___    101 TAATCAAAAAAGGCAAAGTCGTGCAGGCTAGACTCCTGATGATTTTGCTG    150
                     |.|||..||||||.|||.|.||||||||.||.||.|||||.|||.|.||.
RBAM_033940__    101 TGATCCGAAAAGGAAAAATAGTGCAGGCGAGGCTGCTGATCATTCTTCTT    150

BSNT_05618___    151 ACAATTGCCATTGGAACGGCCGTTGCTAATTTCTTTTTAGATTATCTCAA    200
                     ||.|||||.||.||.|||||.||.|||.|.|||||||||||||||||.|.
RBAM_033940__    151 ACCATTGCGATCGGTACGGCAGTCGCTGACTTCTTTTTAGATTATCTTAC    200

BSNT_05618___    201 TTATTCACAGCAGCTTCCCTATCTATTTTAA    231
                     .|||||..|.||||||||.||..||||||||
RBAM_033940__    201 CTATTCGAAACAGCTTCCATACTTATTTTAA    231


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