Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05625 and RBAM_033990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence dna-align/BSNT_05625___atpA.1.9828.seq
# -bsequence dna-align/RBAM_033990___atpA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05625___atpA-RBAM_033990___atpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05625___atpA-RBAM_033990___atpA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05625___atpA
# 2: RBAM_033990___atpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1509
# Identity: 1356/1509 (89.9%)
# Similarity: 1356/1509 (89.9%)
# Gaps: 0/1509 ( 0.0%)
# Score: 6168.0
#
#
#=======================================
BSNT_05625___ 1 GTGAGCATCAAAGCTGAAGAGATTAGCACGCTGATAAAACAGCAAATACA 50
||||||||||||||||||||||||||||||||||||||.||||||||.||
RBAM_033990__ 1 GTGAGCATCAAAGCTGAAGAGATTAGCACGCTGATAAAGCAGCAAATTCA 50
BSNT_05625___ 51 AAATTATCAATCTGATATTGAAGTTCAAGACGTAGGTACAGTCATCCAAG 100
||||||.||||||||.|||||||||||.||||||||||||||||||||||
RBAM_033990__ 51 AAATTACCAATCTGAAATTGAAGTTCATGACGTAGGTACAGTCATCCAAG 100
BSNT_05625___ 101 TCGGTGACGGTATTGCACGTGTGCACGGCCTTGACAACTGTATGGCCGGT 150
||||.|||||||||||.||||||||||||||||||||.||||||||||||
RBAM_033990__ 101 TCGGAGACGGTATTGCGCGTGTGCACGGCCTTGACAATTGTATGGCCGGT 150
BSNT_05625___ 151 GAACTTGTCGAATTTTCAAACGGTGTTTTGGGTATGGCTCAAAACCTTGA 200
||||||||.||.|||||||||||.||||||||||||||||||||||||||
RBAM_033990__ 151 GAACTTGTTGAGTTTTCAAACGGCGTTTTGGGTATGGCTCAAAACCTTGA 200
BSNT_05625___ 201 GGAATCAAACGTAGGTATCGTCATCTTAGGACCTTTCAGTGAGATCCGTG 250
.|||||.||||||||||||||.|||||||||||||.|||.||.|||||||
RBAM_033990__ 201 AGAATCCAACGTAGGTATCGTTATCTTAGGACCTTACAGAGATATCCGTG 250
BSNT_05625___ 251 AGGGAGACGAAGTAAAAAGAACAGGCCGCATCATGGAGGTTCCTGTTGGT 300
|.||.||.||.||.||||||||.||||||||||||||.||||||||.|||
RBAM_033990__ 251 AAGGTGATGAGGTCAAAAGAACGGGCCGCATCATGGAAGTTCCTGTAGGT 300
BSNT_05625___ 301 GAAGAGTTAATCGGCCGTATTGTAAATCCGTTAGGCCAGCCGGTAGACGG 350
|||||.||||||||.|||||.||.||.|||.|.||.||||||||||||||
RBAM_033990__ 301 GAAGAATTAATCGGACGTATCGTCAACCCGCTCGGACAGCCGGTAGACGG 350
BSNT_05625___ 351 ACTAGGCCCGATTCTGACAAGCAAAACTCGTCCGATCGAAAGCCCTGCAC 400
|||.||.||||||||||||||||||||.||||||||||||||||..||.|
RBAM_033990__ 351 ACTGGGTCCGATTCTGACAAGCAAAACACGTCCGATCGAAAGCCAGGCTC 400
BSNT_05625___ 401 CAGGCGTTATGGACCGTAAATCAGTTCATGAACCGCTTCAAACCGGTATC 450
|||||||.||||||||||||||.||.|||||.|||||.|||||.||||||
RBAM_033990__ 401 CAGGCGTAATGGACCGTAAATCGGTACATGAGCCGCTGCAAACGGGTATC 450
BSNT_05625___ 451 AAAGCGATCGATGCACTGATTCCAATCGGCCGCGGCCAGCGTGAGCTGAT 500
|||||||||||.||..|.|||||.|||||||||||.||||||||||||||
RBAM_033990__ 451 AAAGCGATCGACGCGTTAATTCCGATCGGCCGCGGACAGCGTGAGCTGAT 500
BSNT_05625___ 501 CATCGGTGACCGTCAAACAGGTAAAACATCTGTTGCGATCGATGCGATTC 550
.||||||||||||||.|||||||||||||||||||||||.|||.|.||..
RBAM_033990__ 501 TATCGGTGACCGTCAGACAGGTAAAACATCTGTTGCGATTGATACAATCT 550
BSNT_05625___ 551 TGAACCAAAAAGACCAAGACATGATCTGCGTATATGTTGCGATCGGCCAA 600
|.|||||||||||.||||||||||||||.||.||.||.||||||||.|||
RBAM_033990__ 551 TAAACCAAAAAGATCAAGACATGATCTGTGTGTACGTAGCGATCGGTCAA 600
BSNT_05625___ 601 AAAGAATCAACAGTCCGCGGCGTAGTAGAAACATTGCGTAAACACGGCGC 650
||||||||.|||||.|||||||||||.||||||.|.|||||.||.|||||
RBAM_033990__ 601 AAAGAATCTACAGTGCGCGGCGTAGTGGAAACACTTCGTAAGCATGGCGC 650
BSNT_05625___ 651 GCTTGATTATACAATTGTTGTAACGGCGTCTGCGTCACAGCCGGCACCGC 700
|||||||||.||.|||||.||.||||||||.||.|||||||||||.||||
RBAM_033990__ 651 GCTTGATTACACGATTGTCGTGACGGCGTCCGCTTCACAGCCGGCTCCGC 700
BSNT_05625___ 701 TTCTGTACCTGGCACCGTATGCTGGGGTTACAATGGCAGAAGAATTTATG 750
||||||||||.|||||||||||.|||||.|||||||..||||||||.|||
RBAM_033990__ 701 TTCTGTACCTTGCACCGTATGCAGGGGTGACAATGGGTGAAGAATTCATG 750
BSNT_05625___ 751 TACAGCGGCAAGCACGTTCTTGTTGTATACGATGATCTTTCTAAACAAGC 800
||||.|||||||||||||||.||.|||||.||||||.|.||.||||||||
RBAM_033990__ 751 TACAACGGCAAGCACGTTCTCGTCGTATATGATGATTTATCCAAACAAGC 800
BSNT_05625___ 801 TGCCGCTTACCGTGAGCTGTCCTTGCTTCTTCGCCGTCCGCCAGGCCGTG 850
.||||||||||||||||||||.||||||||||||||||||||.|||||||
RBAM_033990__ 801 GGCCGCTTACCGTGAGCTGTCATTGCTTCTTCGCCGTCCGCCGGGCCGTG 850
BSNT_05625___ 851 AAGCGTTCCCTGGGGATGTATTCTATCTTCATTCCCGTCTGCTTGAGCGT 900
||||.||||||||||||||||||||||||||.|||||||||||||||||.
RBAM_033990__ 851 AAGCATTCCCTGGGGATGTATTCTATCTTCACTCCCGTCTGCTTGAGCGC 900
BSNT_05625___ 901 GCAGCAAAGCTTAGCGACGCGAAAGGCGCAGGATCAATTACAGCTCTGCC 950
|||||.|||||.||.||||||||||||||||||||||||||.||.|||||
RBAM_033990__ 901 GCAGCTAAGCTGAGTGACGCGAAAGGCGCAGGATCAATTACGGCGCTGCC 950
BSNT_05625___ 951 GTTCGTAGAAACACAAGCCGGAGATATCTCTGCTTATATTCCGACGAACG 1000
||||||.|||||||||||.|||||||||||.||||||||.|||||.||||
RBAM_033990__ 951 GTTCGTCGAAACACAAGCAGGAGATATCTCCGCTTATATCCCGACAAACG 1000
BSNT_05625___ 1001 TCATTTCCATCACCGACGGACAGATCTTCCTGCAATCTGATTTGTTCTTC 1050
||||||||||.||.|||||||||||.|||||.|||||.||..|.||||||
RBAM_033990__ 1001 TCATTTCCATTACTGACGGACAGATTTTCCTTCAATCCGACCTATTCTTC 1050
BSNT_05625___ 1051 TCAGGCGTACGTCCAGCGATCAACGCCGGATTGTCTGTATCCCGTGTCGG 1100
||||||||.|||||.||||||||.||||||||.||.||||||||||||||
RBAM_033990__ 1051 TCAGGCGTGCGTCCTGCGATCAATGCCGGATTATCCGTATCCCGTGTCGG 1100
BSNT_05625___ 1101 CGGCTCAGCGCAAATCAAAGCGATGAAAAAAGTATCAGGTACTTTGCGTC 1150
|||.|||||.||||||||||||||||||||.|||.|.||.||.|||||||
RBAM_033990__ 1101 CGGATCAGCCCAAATCAAAGCGATGAAAAAGGTAGCGGGAACATTGCGTC 1150
BSNT_05625___ 1151 TTGACCTTGCGTCATACCGTGAGCTGGAAGCATTCGCTCAATTCGGTTCT 1200
|||||||.||.|||||||||||.||.|||||.|||||.||||||||.|||
RBAM_033990__ 1151 TTGACCTGGCTTCATACCGTGAACTTGAAGCGTTCGCCCAATTCGGATCT 1200
BSNT_05625___ 1201 GACCTCGACCAAGCGACTCAGGCAAAACTGAACCGCGGTGCGCGTACAGT 1250
||.||.|||||.|||||||||||.||||||||||||||||||||||||||
RBAM_033990__ 1201 GATCTTGACCAGGCGACTCAGGCGAAACTGAACCGCGGTGCGCGTACAGT 1250
BSNT_05625___ 1251 TGAAGTGCTGAAGCAGGATCTGAACAAGCCGCTTCCGGTTGAAAAGCAAG 1300
|||||||||||||||.||..||||.||.|||||||||||||||||.||.|
RBAM_033990__ 1251 TGAAGTGCTGAAGCAAGACTTGAATAAACCGCTTCCGGTTGAAAAACAGG 1300
BSNT_05625___ 1301 TAGCCATTCTTTATGCGCTGACAAAAGGATATCTCGATGATATTCCTGTG 1350
||||||||||||||||||||||||||||||||||.|||||||||||.||.
RBAM_033990__ 1301 TAGCCATTCTTTATGCGCTGACAAAAGGATATCTTGATGATATTCCGGTT 1350
BSNT_05625___ 1351 GCGGATATCAGACGTTTTGAAGAAGAGTACTACATGTACCTTGACCAAAA 1400
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_033990__ 1351 GCGGATATCAGACGTTTTGAAGAAGAGTACTACATGTACCTTGATCAAAA 1400
BSNT_05625___ 1401 CCATAAAGACCTGCTTGACGGAATTGCGAAAACAGGAAACCTTCCTGCTG 1450
|||||||||.|||||||||||.||||||||||||||||||||||||||||
RBAM_033990__ 1401 CCATAAAGATCTGCTTGACGGCATTGCGAAAACAGGAAACCTTCCTGCTG 1450
BSNT_05625___ 1451 ATGAAGACTTCAATGCTGCAATCGAAGGCTTCAAACGCACATTTGCACCA 1500
|||||||||||||.||||||||||||||||||||||||||||||||||||
RBAM_033990__ 1451 ATGAAGACTTCAAAGCTGCAATCGAAGGCTTCAAACGCACATTTGCACCA 1500
BSNT_05625___ 1501 AGCAACTAA 1509
|||||||||
RBAM_033990__ 1501 AGCAACTAA 1509
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