Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05627 and RBAM_034010

See Amino acid alignment / Visit BSNT_05627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence dna-align/BSNT_05627___atpF.1.9828.seq
#    -bsequence dna-align/RBAM_034010___atpF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05627___atpF-RBAM_034010___atpF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05627___atpF-RBAM_034010___atpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05627___atpF
# 2: RBAM_034010___atpF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 513
# Identity:     443/513 (86.4%)
# Similarity:   443/513 (86.4%)
# Gaps:           0/513 ( 0.0%)
# Score: 1935.0
# 
#
#=======================================

BSNT_05627___      1 ATGTCTCAATTACCACTTGAACTAGGATTGTCGTTTAACGGCGGAGATAT     50
                     ||||||||||||||.||||||.|||||.||||||||||||||||||||||
RBAM_034010__      1 ATGTCTCAATTACCTCTTGAATTAGGACTGTCGTTTAACGGCGGAGATAT     50

BSNT_05627___     51 CCTGTTCCAACTGTTAGCTATGTTAATCTTATTAGCGCTTCTGAAGAAAT    100
                     |||.||||||.||||||||||||||.|.||||||||||||||.|||||||
RBAM_034010__     51 CCTATTCCAATTGTTAGCTATGTTAGTTTTATTAGCGCTTCTCAAGAAAT    100

BSNT_05627___    101 ACGCTTTAGGGCCGCTATTAAACATAATGAAACAGCGTGAAGACCACATC    150
                     .||||.|.||.|||||||||||.||||||||||||||||||||.||.|||
RBAM_034010__    101 TCGCTCTTGGACCGCTATTAAATATAATGAAACAGCGTGAAGATCATATC    150

BSNT_05627___    151 GCTGGAGAAATTACGTCTGCTGAAGAAAAAAATAAAGAAGCGCAGCAGCT    200
                     ||.||.|||||||||||.||||||||||.||||||||||||||||.||||
RBAM_034010__    151 GCCGGCGAAATTACGTCCGCTGAAGAAAGAAATAAAGAAGCGCAGAAGCT    200

BSNT_05627___    201 TATTGAAGAGCAGCGCGTTCTTTTAAAAGAAGCAAGACAGGAATCCCAAA    250
                     .||||||||||||||||||||||||||||||||.|.|||||||||.|||.
RBAM_034010__    201 GATTGAAGAGCAGCGCGTTCTTTTAAAAGAAGCGAAACAGGAATCACAAT    250

BSNT_05627___    251 CTCTTATCGAAAACGCAAAGAAACTGGGAGAGAAGCAAAAAGAAGAGATT    300
                     |.||.||.|||||.||.||.||||||||.||.|||||.||.|||||.|||
RBAM_034010__    251 CACTCATTGAAAATGCGAAAAAACTGGGTGAAAAGCAGAAGGAAGACATT    300

BSNT_05627___    301 ATTCAGGCTGCACGTGCAGAATCTGAACGTCTGAAAGAAGCAGCAAGAAC    350
                     ||.|||||||||||.||.||.||||||.|..||||||||||.||.|||||
RBAM_034010__    301 ATCCAGGCTGCACGCGCCGAGTCTGAAAGATTGAAAGAAGCGGCGAGAAC    350

BSNT_05627___    351 TGAAATCGTGAAGGAAAAAGAACAGGCGGTTTCTGCTCTCCGTGAGCAAG    400
                     .|||||.||.||.|||||||||||.||||||||.||.||.||.|||||||
RBAM_034010__    351 CGAAATTGTCAAAGAAAAAGAACAAGCGGTTTCCGCACTTCGCGAGCAAG    400

BSNT_05627___    401 TAGCGTCTCTTTCTGTCATGATTGCGTCGAAAGTGATCGAAAAAGAACTG    450
                     |.||.||.|||||||||.|.||.||.|||||||||||.||||||||.||.
RBAM_034010__    401 TCGCATCACTTTCTGTCTTAATCGCATCGAAAGTGATTGAAAAAGAGCTT    450

BSNT_05627___    451 GATGAACAAGCGCAAGAGAAATTGATCCAGGACTATCTTAAAGAGGTAGG    500
                     |||||||||||.||.||..||.||||.|||||||||||||||||||||||
RBAM_034010__    451 GATGAACAAGCCCAGGAACAACTGATTCAGGACTATCTTAAAGAGGTAGG    500

BSNT_05627___    501 AGAAAGCCGATGA    513
                     |||||||||||||
RBAM_034010__    501 AGAAAGCCGATGA    513


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