Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05630 and RBAM_034030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence dna-align/BSNT_05630___atpB.1.9828.seq
# -bsequence dna-align/RBAM_034030___atpB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05630___atpB-RBAM_034030___atpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05630___atpB-RBAM_034030___atpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05630___atpB
# 2: RBAM_034030___atpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 742
# Identity: 561/742 (75.6%)
# Similarity: 561/742 (75.6%)
# Gaps: 77/742 (10.4%)
# Score: 2334.5
#
#
#=======================================
BSNT_05630___ 0 -------------------------------------------------- 0
RBAM_034030__ 1 TTGAATCACGATTACAGAACTATTGATTTGTTTGGTCTTACTTTTAATCT 50
BSNT_05630___ 1 -------------ATGATTACTGTGGCGAGTGTGATTGTTTTATTGATTG 37
||||||||||||||.|||||||||||..|..||||||
RBAM_034030__ 51 GACAAACATTCTGATGATTACTGTGGCAAGTGTGATTGTGCTGCTGATTG 100
BSNT_05630___ 38 CTATATTGACGACAAGAACGCTTTCGATCCGTCCCGGAAAAGCCCAGAAC 87
|.||..|.||.||.||||||||.||.||||||||.|||||||||||||||
RBAM_034030__ 101 CGATTCTCACTACGAGAACGCTGTCCATCCGTCCGGGAAAAGCCCAGAAC 150
BSNT_05630___ 88 TTTATGGAATGGATTGTTGATTTCGTACGCAATATTATTGGCAGTACAAT 137
||.||||||||||||||||||||.||.|||||||||||.|||||||||||
RBAM_034030__ 151 TTCATGGAATGGATTGTTGATTTTGTCCGCAATATTATAGGCAGTACAAT 200
BSNT_05630___ 138 GGATTTAAAAACAGGGGCTAACTTCTTGGCACTTGGTGTCACATTGCTGA 187
||||||||||||||||||||||||||||||.||||||||.||.|||||||
RBAM_034030__ 201 GGATTTAAAAACAGGGGCTAACTTCTTGGCGCTTGGTGTAACCTTGCTGA 250
BSNT_05630___ 188 TGTACATATTTGTGTCGAATATGCTGGGGCTGCCGTTCTCTATTACAATC 237
|||||||||||||.||.||||||||||||||||||||.|||.|.||..||
RBAM_034030__ 251 TGTACATATTTGTATCAAATATGCTGGGGCTGCCGTTTTCTGTAACGGTC 300
BSNT_05630___ 238 GGACATGAGCTCTGGTGGAAGTCTCCGACAGCCGATCCTGCCATTACATT 287
|||||.|||||.||||||||.||.|||||.||||||||.||.|||||..|
RBAM_034030__ 301 GGACACGAGCTTTGGTGGAAATCACCGACGGCCGATCCGGCTATTACTCT 350
BSNT_05630___ 288 AACGCTAGCCGTGATGGTTGTTGCTTTAACCCACTACTATGGTGTGAAGA 337
.||.||||||||.||||||||..|.|||||.|||||.||.||.|||||||
RBAM_034030__ 351 GACTCTAGCCGTTATGGTTGTGTCGTTAACGCACTATTACGGCGTGAAGA 400
BSNT_05630___ 338 TGAAAGGGCTCAAGGAATATTCCAAAGACTATTTAAGACCTGTTCCATTC 387
|||||||..|.||||||||.||.||.||.||..|.|||||.|||||..|.
RBAM_034030__ 401 TGAAAGGTTTGAAGGAATACTCTAAGGATTACCTCAGACCGGTTCCGCTT 450
BSNT_05630___ 388 ATGCTCCCGATGAAAATCATCGAAGAGTTTGCGAATACGCTGACTCTAGG 437
|||.||||||||||.|||||.||.||||||||||||||||||||.||.||
RBAM_034030__ 451 ATGTTCCCGATGAAGATCATTGAGGAGTTTGCGAATACGCTGACACTCGG 500
BSNT_05630___ 438 TTTACGGCTGTATGGTAACATCTTCGCCGGTGAGATTCTTCTCGGCCTGC 487
..|.||.||.||.||||||||.||.|||||.||.||||||||.|||||||
RBAM_034030__ 501 ACTTCGTCTTTACGGTAACATTTTTGCCGGGGAAATTCTTCTTGGCCTGC 550
BSNT_05630___ 488 TTGCGGGAT-TAGCGACAAGCCACTATT----CGCAAAGCGTGGC--TCT 530
|||| |.|| |.|||||.| ||| |.||||..||..| |||
RBAM_034030__ 551 TTGC-GAATCTGGCGACGA------ATTTCTACTCAAACAGTTTCTTTCT 593
BSNT_05630___ 531 CGGTCTTGTCGGTACAATCGGTGCCATTCTGCCGATGCTGGCATGGCAAG 580
||||.|.|||||.|||.||||.||||||.|.||||||||.||||||||.|
RBAM_034030__ 594 CGGTTTGGTCGGCACAGTCGGAGCCATTATTCCGATGCTTGCATGGCAGG 643
BSNT_05630___ 581 CATTCAGTTTATTTATTGGTGCCATCCAGGCATTTATTTTTACAATGCTG 630
|||||||.||.||.||.|||.||||||||||||||||.|||||.||||||
RBAM_034030__ 644 CATTCAGCTTGTTCATCGGTACCATCCAGGCATTTATCTTTACGATGCTG 693
BSNT_05630___ 631 ACGATGGTGTACATGTCTCATAAAATCAGTCATGATCATTAA 672
|||||||||||||||||.||.|||||||||||||||||||||
RBAM_034030__ 694 ACGATGGTGTACATGTCACACAAAATCAGTCATGATCATTAA 735
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