Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05637 and RBAM_034060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:08
# Commandline: needle
# -asequence dna-align/BSNT_05637___glyA.1.9828.seq
# -bsequence dna-align/RBAM_034060___glyA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05637___glyA-RBAM_034060___glyA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05637___glyA-RBAM_034060___glyA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05637___glyA
# 2: RBAM_034060___glyA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1250
# Identity: 1056/1250 (84.5%)
# Similarity: 1056/1250 (84.5%)
# Gaps: 4/1250 ( 0.3%)
# Score: 4480.0
#
#
#=======================================
BSNT_05637___ 1 ATGAAACATTTACCTGCGCAAGACGAACAAGTGTTTAACGCCATTAAAAA 50
||||||||||||||||..||||||.|||||||||||||||||||.|||.|
RBAM_034060__ 1 ATGAAACATTTACCTGTACAAGACAAACAAGTGTTTAACGCCATCAAAGA 50
BSNT_05637___ 51 TGAGCGTGAACGCCAACAGACTAAGATCGAATTGATTGCTTCTGAGAACT 100
|||||||.|.||.||||||||||||||||||||.|||||||||||.||||
RBAM_034060__ 51 TGAGCGTAAGCGTCAACAGACTAAGATCGAATTAATTGCTTCTGAAAACT 100
BSNT_05637___ 101 TTGTAAGTGAAGCGGTTATGGAAGCACAAGGATCTGTTTTGACAAATAAG 150
|.||.|..||||||||.||||||||||||||.||||||||.|||||.||.
RBAM_034060__ 101 TCGTGACGGAAGCGGTAATGGAAGCACAAGGCTCTGTTTTAACAAACAAA 150
BSNT_05637___ 151 TACGCAGAAGGATATCCGGGCAAACGCTACTACGGCGGATGCGAGCACGT 200
||.||.|||||.||.||.||||||||||||||||||||.||.|||||.||
RBAM_034060__ 151 TATGCTGAAGGCTACCCCGGCAAACGCTACTACGGCGGCTGTGAGCATGT 200
BSNT_05637___ 201 CGATGTCGTTGAAGATATCGCCCGTGACCGCGCGAAGGAAATCTTTGGAG 250
.|||||||||||.||.||||||||.|||||||||||.||.||.||.||||
RBAM_034060__ 201 TGATGTCGTTGAGGACATCGCCCGCGACCGCGCGAAAGAGATTTTCGGAG 250
BSNT_05637___ 251 CGGAGCATGTAAACGTTCAGCCTCATTCAGGCGCGCAAGCAAACATGGCA 300
|.||||||||||||||||||||.||.||||||||.|||||.||||||||.
RBAM_034060__ 251 CTGAGCATGTAAACGTTCAGCCGCACTCAGGCGCTCAAGCGAACATGGCT 300
BSNT_05637___ 301 GTGTACTTCACGATTTTGGAGCAAGGCGATACTGTACTTGGGATGAACCT 350
||.||||||||||||||.|||||.|||||.||.||.||.|||||||||||
RBAM_034060__ 301 GTTTACTTCACGATTTTAGAGCACGGCGACACGGTGCTCGGGATGAACCT 350
BSNT_05637___ 351 CTCCCACGGCGGCCATTTAACACACGGAAGCCCAGTCAACTTCAGCGGTG 400
|||||||||||||||.|||||||||||||||||.||.||.||||||||||
RBAM_034060__ 351 CTCCCACGGCGGCCACTTAACACACGGAAGCCCGGTTAATTTCAGCGGTG 400
BSNT_05637___ 401 TTCAATATAACTTTGTTGAGTACGGCGTAGATAAAGAAACTCAATATATT 450
|||||||.||||||||.||.|||||.||.||||||||.||.||||||||.
RBAM_034060__ 401 TTCAATACAACTTTGTAGAATACGGTGTCGATAAAGACACGCAATATATA 450
BSNT_05637___ 451 GATTACGATGACGTGCGTGAAAAAGCCCTCGCTCATAAACCGAAGCTTAT 500
|||||.||.||.||||||||||||||.||.||.|||||.|||||.||.||
RBAM_034060__ 451 GATTATGAAGATGTGCGTGAAAAAGCGCTGGCGCATAAGCCGAAACTCAT 500
BSNT_05637___ 501 CGTAGCAGGAGCAAGTGCGTATCCTCGTACAATCGACTTTAAGAAATTCC 550
|||.||.|||||.||.|||||.||.||.||.|||||||||||.|||||||
RBAM_034060__ 501 CGTTGCCGGAGCGAGCGCGTACCCCCGCACGATCGACTTTAAAAAATTCC 550
BSNT_05637___ 551 GTGAAATTGCTGATGAAGTCGGCGCTTACTTCATGGTGGATATGGCACAT 600
|.|||||.|||||||||||||||||||||||||||||.||.|||||.|||
RBAM_034060__ 551 GCGAAATCGCTGATGAAGTCGGCGCTTACTTCATGGTAGACATGGCGCAT 600
BSNT_05637___ 601 ATCGCAGGACTTGTTGCGGCAGGCCTTCATCCAAACCCGGTTCCTTACGC 650
|||||.||.|||||.||.||.|||||||||||.||.||||||||||||||
RBAM_034060__ 601 ATCGCGGGTCTTGTCGCAGCCGGCCTTCATCCGAATCCGGTTCCTTACGC 650
BSNT_05637___ 651 TGATTTCGTTACAACAACAACACATAAAACACTTCGCGGTCCTCGCGGCG 700
|||.||.||.||.|||||.||.||.||||||||||||||.||||||||.|
RBAM_034060__ 651 TGACTTTGTAACGACAACGACTCACAAAACACTTCGCGGACCTCGCGGAG 700
BSNT_05637___ 701 GTATGATCCTTTGCCGTGAAGAGTTTGGCAAGAAAATTGATAAATCGATC 750
|.|||||.|||||||||||||||||.|||||.||.|||||||||||.||.
RBAM_034060__ 701 GAATGATTCTTTGCCGTGAAGAGTTCGGCAAAAAGATTGATAAATCCATT 750
BSNT_05637___ 751 TTCCCTGGAATTCAAGGCGGCCCGCTGATGCACGTTATTGCCGCAAAAGC 800
|||||.|||||.||||||||.|||||.|||||.||.||.||.||.|||||
RBAM_034060__ 751 TTCCCGGGAATCCAAGGCGGACCGCTTATGCATGTCATCGCGGCCAAAGC 800
BSNT_05637___ 801 TGTTTCATTCGGTGAAGT-ATTGCAGGACGATTTCAAAACATATGCACAA 849
.|||||.|||||.||||| .||| |.||.|||||||||||||||||.|||
RBAM_034060__ 801 CGTTTCTTTCGGAGAAGTGCTTG-AAGATGATTTCAAAACATATGCGCAA 849
BSNT_05637___ 850 AACGTCATTTCAAACGCGAAACGTCTGGCTGAAGC-CTTAACGAAAGAGG 898
||||||||.||.|||||||||.|.||||||||..| ||.||| |||||||
RBAM_034060__ 850 AACGTCATCTCGAACGCGAAAAGCCTGGCTGAGTCTCTGAAC-AAAGAGG 898
BSNT_05637___ 899 GCATCCAGCTCGTTTCAGGCGGAACAGACAACCACCTTATCCTTGTTGAC 948
||||.||||||||.||.||||||||.||.|||||||||.|.|||||.|||
RBAM_034060__ 899 GCATTCAGCTCGTATCGGGCGGAACGGATAACCACCTTGTGCTTGTCGAC 948
BSNT_05637___ 949 CTTCGTTCGCTCGGACTGACTGGTAAGGTTGCGGAGCATGTACTTGATGA 998
||.|||||.|||||.|||||.||.||.||.||.||.||.||.||||||||
RBAM_034060__ 949 CTCCGTTCTCTCGGTCTGACCGGAAAAGTCGCTGAACACGTTCTTGATGA 998
BSNT_05637___ 999 AATCGGTATTACGTCTAACAAAAACGCGATTCCATATGATCCTGAAAAAC 1048
||||||.|||||.|||||.|||||||||||.||.||.|||||.|||||||
RBAM_034060__ 999 AATCGGCATTACATCTAATAAAAACGCGATCCCTTACGATCCGGAAAAAC 1048
BSNT_05637___ 1049 CTTTCGTAACAAGCGGCATCCGTCTTGGTACAGCTGCTGTAACCAGCCGC 1098
|.|||||.||||||||.||||||||.|||||.||.|||||.||.||||||
RBAM_034060__ 1049 CGTTCGTCACAAGCGGAATCCGTCTCGGTACGGCAGCTGTGACAAGCCGC 1098
BSNT_05637___ 1099 GGTTTTGACGGAGACGCATTAGAAGAAGTCGGTGCTATCATTGCGCTTGC 1148
||.||||||||.|||||..|.|||||||||||.||.|||||.|..||.||
RBAM_034060__ 1099 GGCTTTGACGGTGACGCGCTTGAAGAAGTCGGCGCCATCATCGGCCTCGC 1148
BSNT_05637___ 1149 ATTGAAAAACCACGAAGACGAAGGAAAACTTGAAGAAGCAAGACAGCGTG 1198
..|||||.|.||.||||||||||.|||||||||||||||.||||||||.|
RBAM_034060__ 1149 GCTGAAACATCATGAAGACGAAGCAAAACTTGAAGAAGCGAGACAGCGCG 1198
BSNT_05637___ 1199 TAGCTGCTCTGACTGATAAATTTCCTTTATATAAAGAATTAGATTATTAA 1248
||.||||..|||||||.||.||||||||||||||||||.|||..||||||
RBAM_034060__ 1199 TATCTGCCTTGACTGAAAAGTTTCCTTTATATAAAGAACTAGGCTATTAA 1248
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