Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05638 and RBAM_034070

See Amino acid alignment / Visit BSNT_05638 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence dna-align/BSNT_05638___ywlG.1.9828.seq
#    -bsequence dna-align/RBAM_034070___ywlG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05638___ywlG-RBAM_034070___ywlG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05638___ywlG-RBAM_034070___ywlG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05638___ywlG
# 2: RBAM_034070___ywlG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 556
# Identity:     412/556 (74.1%)
# Similarity:   412/556 (74.1%)
# Gaps:          26/556 ( 4.7%)
# Score: 1480.0
# 
#
#=======================================

BSNT_05638___      1 ATGAATGAGTTGAAACAAACGTGGA-AGACGATGCTGTCTGAGTTTCAGG     49
                     |||.|.|||.||||.||||..|||| .||| ||||||.||||||||||.|
RBAM_034070__      1 ATGGAAGAGATGAAGCAAAAATGGACGGAC-ATGCTGACTGAGTTTCAAG     49

BSNT_05638___     50 ACCAAGCGGAATTGAAACAAGATCAGCTCT--TCGTCCTTGGATGCAGCA     97
                     |.||.||.|.|.|||...|.| .|||| ||  |.||..|.||.|||||.|
RBAM_034070__     50 AGCAGGCAGGACTGACGGACG-GCAGC-CTGCTGGTGATCGGGTGCAGTA     97

BSNT_05638___     98 CGAGCGAAGTGGCCGGCAGCCGGATCGGCACATCGGGCAGTGTAGATATC    147
                     |.||.||||..|||||.||||||||||||||..|.||.||.|..|||...
RBAM_034070__     98 CAAGTGAAGCCGCCGGAAGCCGGATCGGCACCGCCGGAAGCGGGGATTGG    147

BSNT_05638___    148 GCTGAAAGCATCTACAGCGGACTTGCTGAGCTCCG------GGAAAAAAC    191
                     ||||||...||.|||.||||||||      ..|||      |||||||||
RBAM_034070__    148 GCTGAATTGATATACGGCGGACTT------AACCGGTTTAAGGAAAAAAC    191

BSNT_05638___    192 GGGAATCCATCTGGCGTTTCAATGCTGCGAGCATTTAAACAGAGCGCTTG    241
                     |||..|.|||||.||.||||||||||||||||||||||||||.|||||.|
RBAM_034070__    192 GGGTGTGCATCTTGCTTTTCAATGCTGCGAGCATTTAAACAGGGCGCTGG    241

BSNT_05638___    242 TCGTCGAAGCAGAAACAGCCAAGCTGTTCAGGCTTCCAACCGTTTCTGCC    291
                     ||.|.|||||.|||||.|||.|||.|||||||||.||.|..|||||.|||
RBAM_034070__    242 TCATTGAAGCGGAAACGGCCGAGCGGTTCAGGCTCCCCATTGTTTCAGCC    291

BSNT_05638___    292 GTGCCCGTTCCAAAAGCGGGCGGAGCGATGGCGTCTTATGCGTTTAAGCA    341
                     ||.|||||.||.||||||||||||||.|||||.||||||||.|....|||
RBAM_034070__    292 GTCCCCGTCCCGAAAGCGGGCGGAGCAATGGCCTCTTATGCATACCGGCA    341

BSNT_05638___    342 GATGAAGTCTCCTGTTCTTGTTGAAACCATTCAGGCTGACGCCGGAATTG    391
                     ||||...|||||.||.||.|..|||.|.|||||||||||.|||||.||||
RBAM_034070__    342 GATGCGTTCTCCCGTGCTCGCCGAATCGATTCAGGCTGATGCCGGGATTG    391

BSNT_05638___    392 ATATAGGCGATACGTTTATCGGCATGCATCTGAAGCCGGTGGCTGTCCCT    441
                     |.||.|||||||||||.|||||||||||||||||.||.||.||.||||||
RBAM_034070__    392 ACATCGGCGATACGTTCATCGGCATGCATCTGAAACCCGTTGCCGTCCCT    441

BSNT_05638___    442 GTGCGTGTCTCTCAAAAC----AGCCTCGGTTCAGCTCATGTGACATTGG    487
                     ||.||..|.||   ||.|    || ||.||...|||.||||||||..|||
RBAM_034070__    442 GTCCGGATATC---AAGCCGTGAG-CTTGGAGAAGCACATGTGACGATGG    487

BSNT_05638___    488 CGCGTACACGGCCGAAACTAATCGGCGGAGTGCGGGCGGTTTATGAGTGT    537
                     |.||.|||.|||||||.||.||.||||||.|.||.||.||||||||.||.
RBAM_034070__    488 CCCGGACAAGGCCGAAGCTGATAGGCGGAATTCGCGCCGTTTATGAATGC    537

BSNT_05638___    538 GAATGA    543
                     ||||||
RBAM_034070__    538 GAATGA    543


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