Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05639 and RBAM_034080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:08
# Commandline: needle
# -asequence dna-align/BSNT_05639___rpiB.1.9828.seq
# -bsequence dna-align/RBAM_034080___ywlF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05639___rpiB-RBAM_034080___ywlF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05639___rpiB-RBAM_034080___ywlF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05639___rpiB
# 2: RBAM_034080___ywlF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 367/451 (81.4%)
# Similarity: 367/451 (81.4%)
# Gaps: 2/451 ( 0.4%)
# Score: 1487.0
#
#
#=======================================
BSNT_05639___ 1 ATGAAAGTAGCCATTGCATCGGATCATGGCGGCGTTCACATTCGAAATGA 50
|||||||||||.|||||.||.|||||.||||||||.||.||.||..|.||
RBAM_034080__ 1 ATGAAAGTAGCTATTGCGTCAGATCACGGCGGCGTCCATATCCGCGAAGA 50
BSNT_05639___ 51 AATCAAAGAGT-TAATGGACGAATTGCAAATTGAATATATTGATATGGGC 99
||| |||.||| |..||||.||||||||.||||||||.||||||||||||
RBAM_034080__ 51 AAT-AAAAAGTCTTTTGGATGAATTGCAGATTGAATACATTGATATGGGC 99
BSNT_05639___ 100 TGTGACTGCGGCAGCGGCTCTGTCGATTATCCGGATTATGCTTTTCCGGT 149
|||||.||||||..||||||||||||||||.|.||.||.|||||||||||
RBAM_034080__ 100 TGTGAATGCGGCGCCGGCTCTGTCGATTATTCAGACTACGCTTTTCCGGT 149
BSNT_05639___ 150 GGCCGAAAAAGTGGTTAGCGGCGAAGTTGACAGAGGCATTTTAATTTGCG 199
.||.|||||||||||.|.||||||||.||||||.||.|||||||||||||
RBAM_034080__ 150 AGCGGAAAAAGTGGTGAACGGCGAAGCTGACAGGGGAATTTTAATTTGCG 199
BSNT_05639___ 200 GGACAGGCATCGGCATGAGCATTTCCGCTAATAAAGTAAAAGGGATTCGC 249
|.||||||||||||||||||||.|||||.|||||.|||||.||.||.|||
RBAM_034080__ 200 GCACAGGCATCGGCATGAGCATCTCCGCAAATAAGGTAAAGGGAATACGC 249
BSNT_05639___ 250 TGCGCGCTGGCGCACGATACCTTCAGCGCGAAGGCGACGAGGGAGCATAA 299
||.|||||.||.||.||.|||||||||||.||.||||||.|.||.||.||
RBAM_034080__ 250 TGTGCGCTTGCCCATGACACCTTCAGCGCAAAAGCGACGCGTGAACACAA 299
BSNT_05639___ 300 TGACACAAACATCCTTGCGATGGGTGAACGGGTGATCGGACCTGGTTTGG 349
||||||.||..|.|||||||||||.|||||.||.|||||.||.||..|||
RBAM_034080__ 300 TGACACGAATGTTCTTGCGATGGGCGAACGCGTCATCGGCCCGGGGCTGG 349
BSNT_05639___ 350 CTCGGGAAATCGCAAAAACCTGGCTGACTACTGAGTTTACCGGGGGAAGA 399
|.||.||||||||||||..|||||||||.|||||.|||||.||.||..|.
RBAM_034080__ 350 CGCGCGAAATCGCAAAAGTCTGGCTGACGACTGAATTTACGGGCGGCCGC 399
BSNT_05639___ 400 CACCAAACGCGTATTGGAAAAATCTCCGATTATGAAGAGAAAAACCTGTA 449
|||.||..|||.||.||.||||||.|.|||||.|||||.|||||.|||||
RBAM_034080__ 400 CACGAACGGCGGATCGGCAAAATCGCAGATTACGAAGAAAAAAATCTGTA 449
BSNT_05639___ 450 G 450
.
RBAM_034080__ 450 A 450
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