Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05666 and RBAM_034260
See
Amino acid alignment /
Visit
BSNT_05666 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:10
# Commandline: needle
# -asequence dna-align/BSNT_05666___murAB.1.9828.seq
# -bsequence dna-align/RBAM_034260___murAB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05666___murAB-RBAM_034260___murAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05666___murAB-RBAM_034260___murAB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05666___murAB
# 2: RBAM_034260___murAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1290
# Identity: 1075/1290 (83.3%)
# Similarity: 1075/1290 (83.3%)
# Gaps: 0/1290 ( 0.0%)
# Score: 4515.0
#
#
#=======================================
BSNT_05666___ 1 ATGGAAAAGTTGAATATTGCCGGCGGTGACTCGTTAAACGGTACAGTACA 50
||||||||||||||||||||||||||.||..||||||||||.||.|||||
RBAM_034260__ 1 ATGGAAAAGTTGAATATTGCCGGCGGCGATCCGTTAAACGGAACCGTACA 50
BSNT_05666___ 51 TATCAGCGGCGCTAAAAACAGCGCTGTTGCGTTAATACCTGCAACCATTT 100
||||||||||||.|||||||||||.||.||.||.|||||.|||||||||.
RBAM_034260__ 51 TATCAGCGGCGCGAAAAACAGCGCCGTCGCATTGATACCCGCAACCATTC 100
BSNT_05666___ 101 TGGCAAATTCCGAGGTGACAATTGAAGGGCTTCCAGAGATTTCAGATATT 150
|||||||||||||.||.||.||.|||||||||||.|||||.|||||||||
RBAM_034260__ 101 TGGCAAATTCCGAAGTAACGATCGAAGGGCTTCCGGAGATCTCAGATATT 150
BSNT_05666___ 151 GAAACGCTGCGTGACCTGTTAAAGGAAATCGGCGGCAACGTGCATTTTGA 200
||||||||||||||||||.|.||.|||||||||||.|||||.||||||||
RBAM_034260__ 151 GAAACGCTGCGTGACCTGCTGAAAGAAATCGGCGGAAACGTCCATTTTGA 200
BSNT_05666___ 201 GAATGGGGAAATGGTTGTTGACCCTACGTCGATGATCAGCATGCCGCTTC 250
.||.||.||||||||.||.||||||.|..|||||||||||||||||||||
RBAM_034260__ 201 AAAAGGAGAAATGGTCGTCGACCCTTCCCCGATGATCAGCATGCCGCTTC 250
BSNT_05666___ 251 CTAACGGGAAAGTAAAAAAGCTTCGCGCGTCATATTATTTAATGGGGGCG 300
|.|||||.|||||.|||||.||.|||||.||.|||||.||||||||.|||
RBAM_034260__ 251 CCAACGGCAAAGTGAAAAAACTCCGCGCTTCCTATTACTTAATGGGCGCG 300
BSNT_05666___ 301 ATGCTCGGCCGCTTCAAGCAGGCGGTCATTGGATTGCCTGGCGGCTGTCA 350
|||||.|||||||||||.|||||||||||.|||.||||.|||||.||.||
RBAM_034260__ 301 ATGCTGGGCCGCTTCAAACAGGCGGTCATCGGACTGCCGGGCGGATGCCA 350
BSNT_05666___ 351 CTTAGGGCCCCGTCCGATTGATCAGCATATCAAAGGCTTTGAAGCACTCG 400
..|.|||||.||.||||||||.|||||.||||||||.||||||||.||.|
RBAM_034260__ 351 TCTCGGGCCGCGGCCGATTGACCAGCACATCAAAGGGTTTGAAGCGCTTG 400
BSNT_05666___ 401 GAGCTGAAGTAACCAATGAACAAGGCGCCATTTATTTGCGAGCTGAAAGG 450
|.||.|||||.|||||||||||||||||.||||||.||||.||.||||||
RBAM_034260__ 401 GGGCGGAAGTCACCAATGAACAAGGCGCGATTTATCTGCGCGCCGAAAGG 450
BSNT_05666___ 451 CTGAGAGGCGCACGGATTTATTTAGATGTCGTTAGCGTTGGGGCAACGAT 500
||||||||||||||||||||||||||||||||.|||||.||.||.|||||
RBAM_034260__ 451 CTGAGAGGCGCACGGATTTATTTAGATGTCGTCAGCGTCGGAGCGACGAT 500
BSNT_05666___ 501 TAACATTATGCTCGCCGCTGTTTTGGCAGAAGGGAAAACGATCATCGAAA 550
.||.||.|||||.||||||||..||||.|||||.|||||..|.||.||||
RBAM_034260__ 501 CAATATCATGCTTGCCGCTGTACTGGCTGAAGGTAAAACCGTGATAGAAA 550
BSNT_05666___ 551 ACGCTGCCAAGGAGCCTGAGATCATTGACGTCGCGACATTGCTTACCAGC 600
||||.||||||||.||||||||.|||||.||.||.||||||||.||||||
RBAM_034260__ 551 ACGCCGCCAAGGAACCTGAGATTATTGATGTTGCCACATTGCTCACCAGC 600
BSNT_05666___ 601 ATGGGCGCCAAAATCAAAGGTGCGGGCACCAATGTGATTCGAATCGACGG 650
||||||||.||.||||||||.|||||.||||||||.||..||||||||||
RBAM_034260__ 601 ATGGGCGCAAAGATCAAAGGCGCGGGAACCAATGTAATCAGAATCGACGG 650
BSNT_05666___ 651 CGTGAAGGAACTGCACGGCTGCAAGCATACGATCATTCCGGACAGAATTG 700
|||.||.||.||||||||.||||.||||||||||||||||||||||||||
RBAM_034260__ 651 CGTAAAAGAGCTGCACGGATGCAGGCATACGATCATTCCGGACAGAATTG 700
BSNT_05666___ 701 AGGCCGGGACATTTATGATTGCAGGGGCTGCAATGGGCAAGGAAGTCATT 750
||||.||.||.||||||||.||.||.||.||.|||||.||.|||||||||
RBAM_034260__ 701 AGGCGGGCACCTTTATGATCGCCGGCGCCGCGATGGGGAAAGAAGTCATT 750
BSNT_05666___ 751 ATCGATAACGTCATTCCCACTCATCTAGAGTCGTTAACGGCAAAGCTGAG 800
||.|||||.|||||.||.|||||.||.|||||.||||||||.|||||.||
RBAM_034260__ 751 ATTGATAATGTCATACCGACTCACCTGGAGTCTTTAACGGCGAAGCTCAG 800
BSNT_05666___ 801 AGAAATGGGCTATCATATCGAAACAAGCGACGACCAGCTTCTCATTGTCG 850
.||||||||.|.|||.||.||.||.||.|||||.||||||||.||..|||
RBAM_034260__ 801 GGAAATGGGTTTTCACATTGAGACGAGTGACGATCAGCTTCTTATGCTCG 850
BSNT_05666___ 851 GCGGGCAGAAGAACTTAAAGCCGGTTGACGTCAAAACCCTCGTATACCCG 900
|||||||||||.|..||||.|||.|.|||||.|||||.||.||.||||||
RBAM_034260__ 851 GCGGGCAGAAGCAGATAAAACCGATCGACGTAAAAACGCTTGTTTACCCG 900
BSNT_05666___ 901 GGGTTTCCGACTGATTTACAGCAGCCGATGACGGCGCTCCTGACAAGGGC 950
||.||.|||||||||.|.||||||||||||||..|.||..|.||.||.||
RBAM_034260__ 901 GGATTCCCGACTGATCTTCAGCAGCCGATGACATCTCTGTTAACGAGAGC 950
BSNT_05666___ 951 GAAAGGGACGAGTGTCGTCACAGACACCATCTACTCGGCAAGATTCAAGC 1000
.|..||.|||||.|||||.||.|||||||||||||||||..||||.||.|
RBAM_034260__ 951 CAGCGGCACGAGCGTCGTAACCGACACCATCTACTCGGCCCGATTTAAAC 1000
BSNT_05666___ 1001 ACATTGATGAGCTGAGACGAATGGGCGCCAATATGAAAGTAGAAGGCAGA 1050
|.||.||||||||||||||.|||||.|||||.||||||||.||||||||.
RBAM_034260__ 1001 ATATAGATGAGCTGAGACGGATGGGGGCCAACATGAAAGTGGAAGGCAGG 1050
BSNT_05666___ 1051 TCTGCCATCATCACAGGTCCTGTCGAGCTTCAAGGCGCAAAAGTGAAGGC 1100
||.|||||.|||||.|||||.|.|||||||||.|||||||||||.|||||
RBAM_034260__ 1051 TCGGCCATTATCACCGGTCCGGCCGAGCTTCAGGGCGCAAAAGTAAAGGC 1100
BSNT_05666___ 1101 GAGTGATCTGCGTGCCGGAGCCTGCTTGGTGGTAGCCGGACTGATGGCTG 1150
|||.|||||||||||.||.||.||..||||.||.|||||.||.|||||||
RBAM_034260__ 1101 GAGCGATCTGCGTGCAGGCGCTTGTCTGGTCGTCGCCGGGCTCATGGCTG 1150
BSNT_05666___ 1151 ATGGCGTCACGGAAATTACGGGACTGGAGCATATTGACCGCGGATACAGC 1200
|.|||||.||.||||||||.||.||.||||||.|.||||||||.||||||
RBAM_034260__ 1151 ACGGCGTAACCGAAATTACCGGTCTCGAGCATTTAGACCGCGGCTACAGC 1200
BSNT_05666___ 1201 AGCCTTGAGAAGAAGCTTGAGGGGCTTGGAGCGACAATTTGGCGTGAAAG 1250
|..||||||||.||.||.||.||.||.||.||.|||||.|||||..||||
RBAM_034260__ 1201 AATCTTGAGAAAAAACTCGAAGGTCTGGGCGCCACAATCTGGCGGCAAAG 1250
BSNT_05666___ 1251 AATGACTGACGAAGAAATAGAACAGCTTCAAAATTCATAA 1290
..||||.||||||||.|||||||||||.|||||||||||.
RBAM_034260__ 1251 GCTGACGGACGAAGAGATAGAACAGCTCCAAAATTCATAG 1290
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.