Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05670 and RBAM_034270

See Amino acid alignment / Visit BSNT_05670 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence dna-align/BSNT_05670___ywjH.1.9828.seq
#    -bsequence dna-align/RBAM_034270___tal.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05670___ywjH-RBAM_034270___tal.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05670___ywjH-RBAM_034270___tal.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05670___ywjH
# 2: RBAM_034270___tal
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 640
# Identity:     513/640 (80.2%)
# Similarity:   513/640 (80.2%)
# Gaps:           2/640 ( 0.3%)
# Score: 2045.0
# 
#
#=======================================

BSNT_05670___      1 ATGTTATTCTTTGTTGATACAGCCAATATCGATGAAATTAGAGAAGCGAA     50
                     ||||||||.||..||||||||||.||.||.||.||.||||.||||||..|
RBAM_034270__      1 ATGTTATTTTTCATTGATACAGCAAACATTGACGAGATTAAAGAAGCTTA     50

BSNT_05670___     51 TGAATTAGGAATTCTCGCCGGTGTAACGACGAATCCTAGTTTAGTAGCAA    100
                     ||||.|.||..||||.|||||.||.|||||.||.|||||||||||.||.|
RBAM_034270__     51 TGAACTTGGCGTTCTTGCCGGAGTTACGACAAACCCTAGTTTAGTGGCGA    100

BSNT_05670___    101 AGGAAGCTAACGTATCATTCCACGACCGTCTTCGCGAGATCACAGACGTC    150
                     |.||||||.||||.||.|||||.|||.|.|||||.|||||.||.||.|||
RBAM_034270__    101 AAGAAGCTGACGTGTCTTTCCATGACAGACTTCGTGAGATTACGGAAGTC    150

BSNT_05670___    151 GTGAAAGGGTCTGTAAGCGCAGAGGTTATTTCTTTGAAAGCTGAGGAAAT    200
                     ||||..||.||.||||||||.||.||.|||||..||||.|||||.||.||
RBAM_034270__    151 GTGAGCGGATCAGTAAGCGCGGAAGTCATTTCCCTGAATGCTGAAGAGAT    200

BSNT_05670___    201 GATCGAGGAAGGAAAAGAACTGGCGAAGATCGCTCCGAACATTACGGTGA    250
                     |||.||.|||||.||||||||.|||||.|||||.|||||.||.|||||||
RBAM_034270__    201 GATTGAAGAAGGTAAAGAACTTGCGAAAATCGCACCGAATATCACGGTGA    250

BSNT_05670___    251 AAATCCCAATGACGTCTGACGGTTTAAAAGCGGTAAGAGCACTTACTGAC    300
                     |||||||.|||||||||||.||.||||||||.||||.|||.||.|..|||
RBAM_034270__    251 AAATCCCGATGACGTCTGAAGGGTTAAAAGCCGTAAAAGCGCTGAGCGAC    300

BSNT_05670___    301 TTAGGCATCAAAACAAACGTTACATTGATCTTCAATGCCAACCAGGCGCT    350
                     .|...|||.|||||||||||.||..|.||.||||..||||||||.|||||
RBAM_034270__    301 CTGAACATTAAAACAAACGTAACGCTCATTTTCAGCGCCAACCAAGCGCT    350

BSNT_05670___    351 TCTTGCTGCCAGAGCGGGGGCAACATATGTATCTCCATTCCTGGGACGTT    400
                     |.|.||.||.|||||.|||||.||.|||||||||||.|||.|.||.|||.
RBAM_034270__    351 TTTGGCGGCAAGAGCCGGGGCGACTTATGTATCTCCGTTCTTAGGCCGTC    400

BSNT_05670___    401 TAGATGACATCGGCCACAACGGGCTTGACCTGATTTCAGAAGTTAAACAG    450
                     |.|||||.||||||||.|||||.|||||.||||||||||||.|.|.||||
RBAM_034270__    401 TGGATGATATCGGCCATAACGGTCTTGAACTGATTTCAGAAATAAGACAG    450

BSNT_05670___    451 ATTTTTGATATTCACGGCCTTGACACACAAATCATTGCAGCGTCCATCCG    500
                     ||||||||.|||||.|...||||.|||||||||||.|||||.||||||||
RBAM_034270__    451 ATTTTTGACATTCATGATATTGATACACAAATCATCGCAGCTTCCATCCG    500

BSNT_05670___    501 CCACCCGCAGCACGTGACAGAAGCCGCTCTTA-GAGGGGCTCATATCGGC    549
                     .||..|||||||||||||.||||||||| ||| |.||.||.||||||||.
RBAM_034270__    501 TCATGCGCAGCACGTGACTGAAGCCGCT-TTACGCGGTGCGCATATCGGT    549

BSNT_05670___    550 ACAATGCCGCTGAAAGTCATTCATGCGCTCACTAAACACCCGTTAACAGA    599
                     ||.||||||||||||||||||||...|||..|.|||||.||||||||.||
RBAM_034270__    550 ACGATGCCGCTGAAAGTCATTCACCAGCTGGCGAAACATCCGTTAACGGA    599

BSNT_05670___    600 CAAAGGAATCGAACAATTCCTGGCAGACTGGAACAAATAA    639
                     .|||||.|||||.||||||.|||||||||||||.||||||
RBAM_034270__    600 TAAAGGCATCGAGCAATTCTTGGCAGACTGGAATAAATAA    639


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