Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05676 and RBAM_034310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:10
# Commandline: needle
# -asequence dna-align/BSNT_05676___pyrG.1.9828.seq
# -bsequence dna-align/RBAM_034310___pyrG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05676___pyrG-RBAM_034310___pyrG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05676___pyrG-RBAM_034310___pyrG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05676___pyrG
# 2: RBAM_034310___pyrG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1610
# Identity: 1341/1610 (83.3%)
# Similarity: 1341/1610 (83.3%)
# Gaps: 4/1610 ( 0.2%)
# Score: 5624.0
#
#
#=======================================
BSNT_05676___ 1 ATGACGAAATATATTTTTGTAACCGGGGGAGTTGTATCCTCACTTGGAAA 50
||||||||||||||||||||||||||||||||||||||.|||||.|||||
RBAM_034310__ 1 ATGACGAAATATATTTTTGTAACCGGGGGAGTTGTATCATCACTCGGAAA 50
BSNT_05676___ 51 GGGTATTGTAGCAGCTTCATTAGG--GCGTTTGCTGAAAAACCGCGGACT 98
.||.|||||.||.||.|||.|.|| ||.||| ||||||||.|.||..|
RBAM_034310__ 51 AGGAATTGTGGCTGCGTCACTTGGCCGCCTTT--TGAAAAACAGAGGCAT 98
BSNT_05676___ 99 GAACGTGACGATTCAAAAATTCGATCCATACATCAACGTTGACCCGGGAA 148
||.|||.||.||.||||||||.||.||.||.|||||||||||||||||||
RBAM_034310__ 99 GAGCGTCACCATCCAAAAATTTGACCCTTATATCAACGTTGACCCGGGAA 148
BSNT_05676___ 149 CAATGAGCCCGTACCAGCACGGTGAAGTATTCGTAACGGATGACGGCGCT 198
|.|||||||||||||||||||||||.||||||||.||.||||||||||||
RBAM_034310__ 149 CGATGAGCCCGTACCAGCACGGTGAGGTATTCGTTACCGATGACGGCGCT 198
BSNT_05676___ 199 GAAACAGACTTGGACCTTGGTCACTATGAGCGTTTTATCGACATTAACCT 248
||.||.|||.|.|||.|.||.||.||||||||.||.||.||||||||.||
RBAM_034310__ 199 GAGACTGACCTTGACTTAGGGCATTATGAGCGGTTCATTGACATTAATCT 248
BSNT_05676___ 249 GAATAAATTCAGCAACGTGACAACAGGTAAAATCTATTCAACAGTTCTTA 298
|||.|.|||||||||||||||.||.||||||||||||||..|.||..|.|
RBAM_034310__ 249 GAACAGATTCAGCAACGTGACGACTGGTAAAATCTATTCTGCCGTATTGA 298
BSNT_05676___ 299 AAAAAGAACGCCGCGGAGATTACCTTGGAGGAACCGTACAGGTCATTCCG 348
|||||||.||||||||.||.|||||.||.|||||.||.||||||||||||
RBAM_034310__ 299 AAAAAGAGCGCCGCGGGGACTACCTCGGCGGAACGGTTCAGGTCATTCCG 348
BSNT_05676___ 349 CACATCACAAACGAATTGAAAGACCGTGTTTACCGCGCAGGGAAAGAGAC 398
|||||||||||.|||.||||||||||.||.|||||.|||||.|||||.||
RBAM_034310__ 349 CACATCACAAATGAACTGAAAGACCGCGTGTACCGTGCAGGCAAAGAAAC 398
BSNT_05676___ 399 AAACGCAGATGTTGTCATTACAGAAATCGGCGGTACTGTCGGAGACATCG 448
||||||||||||.||||||||.||.||||||||.||.||.||||||||||
RBAM_034310__ 399 AAACGCAGATGTAGTCATTACTGAGATCGGCGGAACAGTGGGAGACATCG 448
BSNT_05676___ 449 AATCACTGCCATTCCTTGAAGCGATCCGCCAAATGAAGAGCGACATCGGC 498
||||.||.||.|||||||||||.|||||.||||||||.||||||||||||
RBAM_034310__ 449 AATCCCTTCCGTTCCTTGAAGCCATCCGTCAAATGAAAAGCGACATCGGC 498
BSNT_05676___ 499 CGTGAAAACGTAATGTACATCCACTGTACGCTCGTACCTTACATTAAAGC 548
|..||||||||.||||||||.|||||||||||.||.||.|||||.|||||
RBAM_034310__ 499 CACGAAAACGTGATGTACATTCACTGTACGCTTGTTCCGTACATCAAAGC 548
BSNT_05676___ 549 TGCTGGCGAATTAAAAACAAAACCGACACAGCACAGCGTAAAAGAATTGC 598
.||.|||||..|.||||||||||||||.|||||||||||||||||..||.
RBAM_034310__ 549 GGCGGGCGAGCTGAAAACAAAACCGACGCAGCACAGCGTAAAAGAGCTGA 598
BSNT_05676___ 599 GCAGCTTGGGCATTCAGCCAAACATCATCGTCGTTCGTACAGAAATGCCG 648
|.|||.|.||.||||||||.||.|||||||||||.||.||||||||||||
RBAM_034310__ 599 GAAGCCTCGGTATTCAGCCTAATATCATCGTCGTGCGCACAGAAATGCCG 648
BSNT_05676___ 649 ATTTCTCAAGATATGAAAGATAAAATCGCGCTTTTCTGCGACATCGATAC 698
||||||||||||||||||||||||||.|||||.||||||||.||.||.||
RBAM_034310__ 649 ATTTCTCAAGATATGAAAGATAAAATTGCGCTCTTCTGCGATATTGACAC 698
BSNT_05676___ 699 AAAAGCGGTTATTGAATGTGAAGATGCGGACAACCTTTACTCCATTCCGC 748
.||||||||.||.||.||.||||||||||||||||||||||||||.||||
RBAM_034310__ 699 GAAAGCGGTCATCGAGTGCGAAGATGCGGACAACCTTTACTCCATCCCGC 748
BSNT_05676___ 749 TGGAGCTTCAAAAACAAGGGCTTGATAAGCTTGTTTGCGAGCACATGAAA 798
|..|.|||||..|.||.||.||.|||||||||||.|||||.||.||||||
RBAM_034310__ 749 TTAACCTTCAGGAGCAGGGACTCGATAAGCTTGTCTGCGATCATATGAAA 798
BSNT_05676___ 799 TTGGCATGCAAAGAAGCGGAAATGTCCGAGTGGAAAGAGCTTGTTAACAA 848
||.|.|||||||||..||||.|||.|.||.||||||||.|||||.|..||
RBAM_034310__ 799 TTAGAATGCAAAGACCCGGATATGACGGAATGGAAAGACCTTGTCACGAA 848
BSNT_05676___ 849 AGTCAGCAACCTGTCTCAAACGATTACAATCGGCCTTGTCGGCAAATACG 898
|||.|..|||.|||||.||||.|||||||||.||||.|||||.|||||||
RBAM_034310__ 849 AGTGAAAAACTTGTCTAAAACCATTACAATCAGCCTCGTCGGTAAATACG 898
BSNT_05676___ 899 TTGAGCTTCCTGACGCATACATTTCTGTTGTCGAGTCTCTCCGCCATGCG 948
|.|||||||..|||||.||||||||.||.||.||.||.||.|||||.||.
RBAM_034310__ 899 TCGAGCTTCAGGACGCTTACATTTCAGTCGTTGAATCACTGCGCCACGCC 948
BSNT_05676___ 949 GGCTATGCGTTTGACACAGATGTAAAAGTGAAGTGGATCAACGCGGAAGA 998
|||||||||||||||.|.|||||.||..|.||.|||||.|||||.|||||
RBAM_034310__ 949 GGCTATGCGTTTGACGCTGATGTGAAGATCAAATGGATTAACGCCGAAGA 998
BSNT_05676___ 999 AGTGACAGAAAACAATATCGCAGAACTCACAAGCGGAACAGACGGCATCA 1048
|||||||||||.||||||...|||.||.||..||||.||||||||.||||
RBAM_034310__ 999 AGTGACAGAAAGCAATATTCAAGAGCTGACTGGCGGCACAGACGGAATCA 1048
BSNT_05676___ 1049 TTGTGCCGGGCGGATTCGGAGACCGCGGTGTTGAAGGCAAAATCGTCGCG 1098
|.|||||.|||||.|||||||||||||||||.|||||.||||||.||||.
RBAM_034310__ 1049 TCGTGCCCGGCGGTTTCGGAGACCGCGGTGTAGAAGGGAAAATCATCGCC 1098
BSNT_05676___ 1099 ACAAAATACGCGCGCGAAAACAACATTCCGTTCTTGGGTATTTGCTTGGG 1148
.|.||.||.|||||.||.||.||.|||||||||||.||.||.|||.|.||
RBAM_034310__ 1099 GCCAAGTATGCGCGTGAGAATAAAATTCCGTTCTTCGGCATCTGCCTCGG 1148
BSNT_05676___ 1149 CATGCAGGTGGCGTCTATTGAATACGCACGAAACGTATTGGGCTTAAAAG 1198
.||||||.|.||.||.||||||||.||.|||||||||||.||..|..|||
RBAM_034310__ 1149 TATGCAGATTGCATCCATTGAATATGCGCGAAACGTATTAGGTCTGGAAG 1198
BSNT_05676___ 1199 GCGCTCACTCAGCGGAAATTGATCCGTCAACTCAATACCCGATCATTGAT 1248
|.||||||||.|||||.||.||||||||.||||..||.||||||||.||.
RBAM_034310__ 1199 GGGCTCACTCTGCGGAGATCGATCCGTCCACTCCTTATCCGATCATCGAC 1248
BSNT_05676___ 1249 CTTCTTCCTGAACAAAAGGATGTGGAGGATCTCGGGGGAACGCTTCGTCT 1298
|||||.||.||||||||.|||||.||||||||.||.||||||||||||||
RBAM_034310__ 1249 CTTCTGCCAGAACAAAAAGATGTCGAGGATCTTGGAGGAACGCTTCGTCT 1298
BSNT_05676___ 1299 CGGCCTTTACCCTTGTAAGCTTGAAGAAGGCACGAAAGCCTTTGAAGTGT 1348
|||.||.|||||||||||||||.|.||||.||||||||||||.||||.||
RBAM_034310__ 1299 CGGACTGTACCCTTGTAAGCTTCAGGAAGACACGAAAGCCTTCGAAGCGT 1348
BSNT_05676___ 1349 ATCAGGATGAAGTGGTGTACGAGCGCCACCGCCACCGCTATGAGTTTAAC 1398
||..||||||||||||.|||||.||||||||||||||.|||||.||.|||
RBAM_034310__ 1349 ATGCGGATGAAGTGGTATACGAACGCCACCGCCACCGTTATGAATTCAAC 1398
BSNT_05676___ 1399 AATGAATTCAGACAGCAAATGGAAGAGCAAGGCTTCGTATTCTCAGGCAC 1448
||.||||.|||||||||||||||||||.|.||.||.||.||||||||.||
RBAM_034310__ 1399 AACGAATACAGACAGCAAATGGAAGAGAACGGTTTTGTGTTCTCAGGAAC 1448
BSNT_05676___ 1449 AAGCCCTGATGGACGCCTTGTTGAAATCATCGAGCTGAAAGACCATCCTT 1498
|||||||||.||.||.|||||.||||||||||||||||||||||||||||
RBAM_034310__ 1449 AAGCCCTGACGGCCGTCTTGTGGAAATCATCGAGCTGAAAGACCATCCTT 1498
BSNT_05676___ 1499 GGTTCGTGGCTTCTCAGTTCCATCCAGAGTTCAAGTCAAGACCGACAAGA 1548
|||..||.||||..||||||||.||.||||||||.|||||||||||||||
RBAM_034310__ 1499 GGTATGTCGCTTGCCAGTTCCACCCTGAGTTCAAATCAAGACCGACAAGA 1548
BSNT_05676___ 1549 CCTCAGCCTCTATTCAAAGGCTTTATCGGAGCGTCTGTCGAAGCTGCAAA 1598
|||||||||.|||||||||.|||||||||.||.||.||..||||||||.|
RBAM_034310__ 1549 CCTCAGCCTTTATTCAAAGACTTTATCGGCGCTTCCGTACAAGCTGCAGA 1598
BSNT_05676___ 1599 TCAGAAGTAA 1608
.|||||||||
RBAM_034310__ 1599 ACAGAAGTAA 1608
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