Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05725 and RBAM_034510

See Amino acid alignment / Visit BSNT_05725 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:14
# Commandline: needle
#    -asequence dna-align/BSNT_05725___ywhL.1.9828.seq
#    -bsequence dna-align/RBAM_034510___ywhL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05725___ywhL-RBAM_034510___ywhL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05725___ywhL-RBAM_034510___ywhL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05725___ywhL
# 2: RBAM_034510___ywhL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1377
# Identity:    1277/1377 (92.7%)
# Similarity:  1277/1377 (92.7%)
# Gaps:           0/1377 ( 0.0%)
# Score: 5985.0
# 
#
#=======================================

BSNT_05725___      1 ATGAAAAAGAATGATCTTTCTGCTTTACAGGAAAATTGTTTCTGTTTTTG     50
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
RBAM_034510__      1 ATGAAAAAGAATGATCTGTCTGCTTTACAGGAAAATTGTTTCTGTTTTTG     50

BSNT_05725___     51 TGATGAGGAAATTAGCCGGGAAGCGCCGTTTCAAGTGCCGATAGATATCC    100
                     ||||||||||||||||.|.|||||||||||||||||||||||.||.||.|
RBAM_034510__     51 TGATGAGGAAATTAGCAGAGAAGCGCCGTTTCAAGTGCCGATTGACATTC    100

BSNT_05725___    101 CTGAGGGCTTCAAGGTTGATTCGGCAGAAGCGTCAGCGGCTGTTACATGG    150
                     |.|||||.||||...|||||||.||.|||||..|.|||.|.|||||||||
RBAM_034510__    101 CCGAGGGGTTCACCATTGATTCTGCCGAAGCAGCTGCGACGGTTACATGG    150

BSNT_05725___    151 AGTACAGACAATTTGTCCTGTATCAGTGAGCCTTGCTTAATCCAGACTGG    200
                     |||||.||..||||.|..||||||||||||||||||||||||||||||||
RBAM_034510__    151 AGTACTGATCATTTATTATGTATCAGTGAGCCTTGCTTAATCCAGACTGG    200

BSNT_05725___    201 GCCGGAACCAGAAGATATCGGTGTTCGATATGCTGTGAGAGTACAAGGGA    250
                     |||||||||||||||||||||||||||||||||.|||||||||.||||||
RBAM_034510__    201 GCCGGAACCAGAAGATATCGGTGTTCGATATGCCGTGAGAGTAAAAGGGA    250

BSNT_05725___    251 CCATTACGCTTCTTGTCAGTGTGTCGCCTGTACGAAATCAATATGGACAA    300
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034510__    251 CCGTTACGCTTCTTGTCAGTGTGTCGCCTGTACGAAATCAATATGGACAA    300

BSNT_05725___    301 GGAGACGGGGCTGTTTCGGTGATTCATACCGAAGAGATTGATCAAGTTGT    350
                     ||.||||||.|||||||.|||||||||||.||||||||||||||||||||
RBAM_034510__    301 GGGGACGGGTCTGTTTCTGTGATTCATACTGAAGAGATTGATCAAGTTGT    350

BSNT_05725___    351 TTATTATGCAGCACAGTCTGACCGCTGTCCTGATTTTAGTCAAATGACAG    400
                     ||||||||||||.|||||||.|||||||||||||||.||||||||.||.|
RBAM_034510__    351 TTATTATGCAGCGCAGTCTGGCCGCTGTCCTGATTTCAGTCAAATAACGG    400

BSNT_05725___    401 TGGAAGATCTTCTCATTGTACCGCCTTTCTACGGCAGTCCGCTTACGGTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034510__    401 TGGAAGATCTTCTCATTGTACCGCCTTTCTACGGCAGTCCGCTTACGGTG    450

BSNT_05725___    451 GCCGGGACACTTGTTTTACCGCCATCGCCAGACCCTCAATCATATGTGTT    500
                     .|||||||||||||||||||||||.||||||||||||||||.||||||||
RBAM_034510__    451 ACCGGGACACTTGTTTTACCGCCACCGCCAGACCCTCAATCGTATGTGTT    500

BSNT_05725___    501 TACTGCCAATACTGGAGACAGCACGGTTTCGGTCATTGATGCAGATTTAA    550
                     |||.||||||.|.||||||||||||||||||||.||||||.|||||||||
RBAM_034510__    501 TACAGCCAATTCAGGAGACAGCACGGTTTCGGTTATTGATTCAGATTTAA    550

BSNT_05725___    551 ACACTGTTGTAAAAACAATCCCGTTTTCTGCTGTGCCAACTAATCTAGGC    600
                     ||||||||||||||||||||||.|||||||..||||||||||||.|||||
RBAM_034510__    551 ACACTGTTGTAAAAACAATCCCTTTTTCTGACGTGCCAACTAATTTAGGC    600

BSNT_05725___    601 GTTACTTTCGATAAAGCATTCACGTATATCCTCCATGGAAATACCAACCT    650
                     |||||||||||||||||.|||||||||.||||||||||.|||||||||||
RBAM_034510__    601 GTTACTTTCGATAAAGCTTTCACGTATGTCCTCCATGGGAATACCAACCT    650

BSNT_05725___    651 TGTCTCAGTGATTGATAATAAAACATTAACTATCATAAATACCATTACTG    700
                     ||||||||||.|.|||||||||||||||||.||||||||||||||.||||
RBAM_034510__    651 TGTCTCAGTGCTAGATAATAAAACATTAACCATCATAAATACCATCACTG    700

BSNT_05725___    701 TTGGAGGAGGGCCGAGAAAAATCGAATTTGATCCAACAGATGAGTTCGCA    750
                     |||||||||||||||||||..|.|||||||||.||||||||||||||||.
RBAM_034510__    701 TTGGAGGAGGGCCGAGAAAGGTTGAATTTGATTCAACAGATGAGTTCGCG    750

BSNT_05725___    751 TACGTGATGGCCGCCGGATCTATATATGTGATTAACACGGCCTCTCAATC    800
                     |||||||||||||||||||||||||||.||||.||||.||||||||||||
RBAM_034510__    751 TACGTGATGGCCGCCGGATCTATATATATGATCAACATGGCCTCTCAATC    800

BSNT_05725___    801 GGTCATTGATGTCATTCCGATACCCGGCGCTTTAGACTTTGCTCTTGATC    850
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_034510__    801 GGTCGTTGATGTCATTCCGATACCCGGCGCTTTAGACTTTGCTCTTGATC    850

BSNT_05725___    851 CGAATGGACAGTATGTCTATACCGCTAATGGAAGCAGTTGGTCGGTTGAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034510__    851 CGAATGGACAGTATGTCTATACCGCTAATGGAAGCAGTTGGTCGGTTGAT    900

BSNT_05725___    901 AAATATGATGTAAATACTGGGCAGTTGGTAGAAAGTATCATAGATTCATT    950
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_034510__    901 AAATATGATGTAAATACTGGGCAGTTGGTAGAAAGTATCATAGATACATT    950

BSNT_05725___    951 TGAATTTCCCAGTTTAATTGCAACTCCTTACGCTGGAAATTTTGCGTACG   1000
                     |||||||||||||||||||||.||||||||||||||||||||||||||.|
RBAM_034510__    951 TGAATTTCCCAGTTTAATTGCCACTCCTTACGCTGGAAATTTTGCGTATG   1000

BSNT_05725___   1001 TGTTGAATGGTGAGTTGTGGCCGAAAGGTGTAACGGAGATTAGTTTGTCT   1050
                     ||||||||||||||.||..||||||||||||||||||||||||||||||.
RBAM_034510__   1001 TGTTGAATGGTGAGCTGCTGCCGAAAGGTGTAACGGAGATTAGTTTGTCA   1050

BSNT_05725___   1051 CCATTAAGCAGGGGAGGGGACTTCAGCCGTTTATTTGAAACGCTGATGAC   1100
                     |||||||||||||||||.|||||||.||||||||||||||||||||.|||
RBAM_034510__   1051 CCATTAAGCAGGGGAGGCGACTTCAACCGTTTATTTGAAACGCTGAGGAC   1100

BSNT_05725___   1101 GATTGTATTTTCTCTCGATAGTACTAGAGCTTATTTTCTAGAGCCATATA   1150
                     ||||||||||||||.||||||.|||||.||||||||||||||||||||||
RBAM_034510__   1101 GATTGTATTTTCTCGCGATAGCACTAGGGCTTATTTTCTAGAGCCATATA   1150

BSNT_05725___   1151 GTGAACCGTTTCTCATTAATAACTTATATGTAGTTAATACGGCCAGACAG   1200
                     ||||||||||||||||||||||||||||.||||||||||||||..|||||
RBAM_034510__   1151 GTGAACCGTTTCTCATTAATAACTTATACGTAGTTAATACGGCTGGACAG   1200

BSNT_05725___   1201 AGGATCATTGCAAACGTGTCTCTCCCCGGCGCCTTTGACCTCGCCGTAAC   1250
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_034510__   1201 AGGATCATTGCAAACGTGTCTCTGCCCGGCGCCTTTGACCTCGCCGTAAC   1250

BSNT_05725___   1251 GCCGGACAAACAGTATATTTATGCGGCACAGCCCAACGACAATGCTGTGA   1300
                     .||.||.||.|||...||||||||.|||||||||..|||||||.|.||.|
RBAM_034510__   1251 ACCTGATAATCAGGGCATTTATGCAGCACAGCCCGGCGACAATACCGTAA   1300

BSNT_05725___   1301 CCGTGTACCGCACAAGTGATTATACAGCCGTGACGGTGATTCCGGTTGGC   1350
                     |||||||||||||.|||||||||||||||.|||||||||||||||||||.
RBAM_034510__   1301 CCGTGTACCGCACGAGTGATTATACAGCCATGACGGTGATTCCGGTTGGG   1350

BSNT_05725___   1351 GCGGGTCCGTCTGCGATTGCGATGTAG   1377
                     .|.||||||||.|||||||||||||||
RBAM_034510__   1351 ACTGGTCCGTCAGCGATTGCGATGTAG   1377


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