Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05752 and RBAM_034710
See
Amino acid alignment /
Visit
BSNT_05752 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:15
# Commandline: needle
# -asequence dna-align/BSNT_05752___ywfO.1.9828.seq
# -bsequence dna-align/RBAM_034710___ywfO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05752___ywfO-RBAM_034710___ywfO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05752___ywfO-RBAM_034710___ywfO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05752___ywfO
# 2: RBAM_034710___ywfO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1304
# Identity: 1096/1304 (84.0%)
# Similarity: 1096/1304 (84.0%)
# Gaps: 4/1304 ( 0.3%)
# Score: 4643.0
#
#
#=======================================
BSNT_05752___ 1 ATGGCGTATCCAAATGGAAAATTATCAGAAGAAAAAGTGTTTAAAGATCC 50
||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_034710__ 1 ATGGCGTATCCAAACGGAAAATTATCAGAAGAAAAAGTGTTTAAAGATCC 50
BSNT_05752___ 51 GGTGCACCGCTATGTTCATGTTCGGGACAAGCTGATATGGGATTTAATCG 100
.||.|||||||||||||||||.||||||||||||||.||||||||.||||
RBAM_034710__ 51 CGTTCACCGCTATGTTCATGTGCGGGACAAGCTGATCTGGGATTTGATCG 100
BSNT_05752___ 101 GAACCCGTGAATTTCAGCGTCTCCGCAGAATTAAGCAGCTCGGCACGACC 150
|.|||||||||||||||||.||.|||.|.||.||.||||||||.|||||.
RBAM_034710__ 101 GCACCCGTGAATTTCAGCGGCTGCGCCGGATCAAACAGCTCGGTACGACG 150
BSNT_05752___ 151 TATTTGACGTTCCATGGGGCTGAGCACAGCCGGTTCAACCATTCTCTCGG 200
|||||||||||.||.||.||.||.||||||||.||.||||||||||||||
RBAM_034710__ 151 TATTTGACGTTTCACGGCGCGGAACACAGCCGTTTTAACCATTCTCTCGG 200
BSNT_05752___ 201 TGTCTATGAAATTGTCAGAAGAATGGTTGATGACGTCTTTAAAGGCCGCC 250
.||||||||.|||||||||.|||||||||||||.||.||||||||.||.|
RBAM_034710__ 201 CGTCTATGAGATTGTCAGACGAATGGTTGATGATGTTTTTAAAGGGCGTC 250
BSNT_05752___ 251 CTGAATGGGATGACAGTGAGCGCGAACTCTGTTTGGCCGCGGCGCTGCTT 300
|||||||||||||||.|||.||||||||||||.|...|||.|||||..|.
RBAM_034710__ 251 CTGAATGGGATGACAATGAACGCGAACTCTGTCTCAGCGCCGCGCTTTTG 300
BSNT_05752___ 301 CATGACCTCGGGCACGGGCCGTTCTCGCATTCATTTGAAAAGGTCTTTCA 350
||.||..|.||.||.||||||||.||||||||.|||||||||||.|||||
RBAM_034710__ 301 CACGATTTGGGACATGGGCCGTTTTCGCATTCCTTTGAAAAGGTTTTTCA 350
BSNT_05752___ 351 CCTTGACCACGAGGATTTTACAAGAGGTATCATTTTGGGAGACACGGAGG 400
.||.||.||.||.||.|.|||.||.|..||||||.|.||.|||||.||||
RBAM_034710__ 351 TCTGGATCATGAAGACTATACGAGGGAAATCATTCTCGGCGACACCGAGG 400
BSNT_05752___ 401 TTAATCAGGTGCTCAGAAAGGTGAGCCCGGGTTTCCCTCAGGATGTTGCT 450
|.||||||||.||||||||||.|.|.|||||.||.||.|||||||||||.
RBAM_034710__ 401 TGAATCAGGTTCTCAGAAAGGCGGGACCGGGATTTCCGCAGGATGTTGCC 450
BSNT_05752___ 451 GAAGTCATTGCCAAAACATATAAAAACAAGCAAGTGGTCAGCCTGATTTC 500
||||||||||||||||||||.||||||||.||.|||||||||.|||||||
RBAM_034710__ 451 GAAGTCATTGCCAAAACATACAAAAACAAACAGGTGGTCAGCTTGATTTC 500
BSNT_05752___ 501 GAGTCAGATTGACGCAGACCGCATGGATTACCTGCAGCGCGACGCATATT 550
|||.|||||||||||.|||.|.|||||||||||.|||||.||||||||.|
RBAM_034710__ 501 GAGCCAGATTGACGCCGACAGGATGGATTACCTTCAGCGGGACGCATACT 550
BSNT_05752___ 551 ATACGGGCGTCAGCTACGGCCATTTTGATATGGAGCGGATTCTTCGGGTG 600
|||||||||||||||||||.||||||||||||||.||||||.|..|||||
RBAM_034710__ 551 ATACGGGCGTCAGCTACGGACATTTTGATATGGAACGGATTTTAAGGGTG 600
BSNT_05752___ 601 ATGCGGCCGCGCGAGGATCAGATCGTCATTAAAGAAAGCGGAATGCACGC 650
|||||.|||||.|||||.||.|||||||||||..|||||||.||||||||
RBAM_034710__ 601 ATGCGTCCGCGAGAGGACCAAATCGTCATTAAGCAAAGCGGCATGCACGC 650
BSNT_05752___ 651 TGTCGAAGACTATATCATGAGCCGTTACCAAATGTACTGGCAGGTCTACT 700
.||||||||||||||.||||||||.||.|||||||||||||||||.||.|
RBAM_034710__ 651 CGTCGAAGACTATATTATGAGCCGCTATCAAATGTACTGGCAGGTGTATT 700
BSNT_05752___ 701 TCCATCCTGTGACTAGAAGTGCAGAGGTCATTTTAACGAAGATTCTTCAC 750
|.|||||.|||||.|||||.||.||.||||||||.|||||.|||||.|||
RBAM_034710__ 701 TTCATCCCGTGACGAGAAGCGCTGAAGTCATTTTGACGAAAATTCTCCAC 750
BSNT_05752___ 751 AGGGCGAAGCAGCTGCATGATGAAGGCTATGTCTTCACTCACGCTCCGGT 800
.|.|||||||||||.|||||.|||||.|||.|.||||||||.|||||.||
RBAM_034710__ 751 CGTGCGAAGCAGCTCCATGAAGAAGGGTATATATTCACTCATGCTCCCGT 800
BSNT_05752___ 801 TCATTTCTATTCTATTTTTGAAGGAAAATTGACACTGGAGGATTATGTAA 850
||||||.|||||.|||||||||||.||..||||.||.|.|||||||.|.|
RBAM_034710__ 801 TCATTTTTATTCCATTTTTGAAGGGAAGCTGACGCTTGCGGATTATCTGA 850
BSNT_05752___ 851 AGCTGGATGAATCTATTATTTTGTATTACTTCCAGGCCTGGGAGGATGAA 900
||||.||||||.|.||||||||.|||||.||||||||.||||||||.|||
RBAM_034710__ 851 AGCTTGATGAAGCCATTATTTTATATTATTTCCAGGCTTGGGAGGAAGAA 900
BSNT_05752___ 901 GAAGACGCGATTTTATCCGACTTGTGCCGCAGATTCATTAACCGCCAGCT 950
||.|||.|||||.|.|||||||||||||||.|.|||||||||||||||||
RBAM_034710__ 901 GAGGACCCGATTCTGTCCGACTTGTGCCGCCGCTTCATTAACCGCCAGCT 950
BSNT_05752___ 951 TTTCCAATACGTTGAATTCAATCCGAATGAAGAAATGTCGGCTTATTTTG 1000
.||.|||||.|..|||||.||.||.|||||.|||||||||||||||||||
RBAM_034710__ 951 GTTTCAATATGCCGAATTTAACCCCAATGAGGAAATGTCGGCTTATTTTG 1000
BSNT_05752___ 1001 AGCTGACTTCATTGTTCAAAGAGGCGGGGATCGATCCGAGCTATTATTTG 1050
|.|||||..|..||||.|||||||||||.||.|||||.|..||.|||||.
RBAM_034710__ 1001 AACTGACCGCTCTGTTTAAAGAGGCGGGAATTGATCCCAATTACTATTTA 1050
BSNT_05752___ 1051 GTCGTTGATTCTTCATCAGATCTGCCATACGATTTTTACCGACCAGGAGA 1100
||.||.|||||||||||.||||||||.||.|||||||||||.||.||.||
RBAM_034710__ 1051 GTGGTCGATTCTTCATCGGATCTGCCGTATGATTTTTACCGGCCGGGTGA 1100
BSNT_05752___ 1101 GGAAGAGGAGCGTCTGCCGATCCATCTCTTGACGCAAAACGGCCAAATTA 1150
.||.||||||||||||||.||.||.||.||.|||||.||.|||||.||.|
RBAM_034710__ 1101 AGAGGAGGAGCGTCTGCCCATTCACCTGTTAACGCAGAAGGGCCAGATCA 1150
BSNT_05752___ 1151 AAGAGCTGTCCAGACAGTCGGCTATTGTGGAATCCATCTCAGGTAAACGG 1200
|||||||||||||.|||||.||.|||||.||||||||.||.||.|||||.
RBAM_034710__ 1151 AAGAGCTGTCCAGGCAGTCCGCCATTGTCGAATCCATTTCGGGCAAACGC 1200
BSNT_05752___ 1201 CGGACGGACCACAAGCTGTACTATCCAAAGGACTTGATTTGTGACG--GC 1248
|||||||||||.|||||.||||||||.|.||||.|.|||||||||| .|
RBAM_034710__ 1201 CGGACGGACCATAAGCTCTACTATCCGATGGACCTCATTTGTGACGATTC 1250
BSNT_05752___ 1249 ACTAAACATCCGGAAGCGAAAATGAAAATCCGGCAGCTGCTGGGACTGAC 1298
|..|||| ||.|||||.|||.|.||||||||||||||||||||||||||
RBAM_034710__ 1251 AGAAAAC--CCTGAAGCAAAATTAAAAATCCGGCAGCTGCTGGGACTGAC 1298
BSNT_05752___ 1299 ATAG 1302
||||
RBAM_034710__ 1299 ATAG 1302
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.