Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05754 and RBAM_034720

See Amino acid alignment / Visit BSNT_05754 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:15
# Commandline: needle
#    -asequence dna-align/BSNT_05754___ywzC.1.9828.seq
#    -bsequence dna-align/RBAM_034720___ywzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05754___ywzC-RBAM_034720___ywzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05754___ywzC-RBAM_034720___ywzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05754___ywzC
# 2: RBAM_034720___ywzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity:     198/225 (88.0%)
# Similarity:   198/225 (88.0%)
# Gaps:           0/225 ( 0.0%)
# Score: 882.0
# 
#
#=======================================

BSNT_05754___      1 ATGGCTAATGAATTTCGAGTGTGTGATGATTGCCAAGCCACTAATATCAA     50
                     ||||||||||||||.||||||||||||||||||||.|||||.|||||.||
RBAM_034720__      1 ATGGCTAATGAATTCCGAGTGTGTGATGATTGCCAGGCCACCAATATTAA     50

BSNT_05754___     51 AACATTGCTGCCGCGTTTGAAAGAAGTGGACCCGGACGCAAAGGTTGAGG    100
                     .||.||||||||||||||||||||||..||||||||.|||||.||.||||
RBAM_034720__     51 GACTTTGCTGCCGCGTTTGAAAGAAGCTGACCCGGATGCAAAAGTGGAGG    100

BSNT_05754___    101 TAGGATGCCAATCTTATTGCGGGCCCGGACGGAAAAAATCATTTGCTTTT    150
                     |.|||||.||.||.|||||||||||||||||.||||||||.||||||||.
RBAM_034720__    101 TCGGATGTCAGTCATATTGCGGGCCCGGACGCAAAAAATCGTTTGCTTTC    150

BSNT_05754___    151 GTGAACAATCGCCCGCTGTCAGCTCCGACAGAGGATGAGCTGATTGACAA    200
                     ||.|||||.|||||||||||.||.|||||.|||||||||||||||||.||
RBAM_034720__    151 GTAAACAACCGCCCGCTGTCGGCGCCGACTGAGGATGAGCTGATTGAGAA    200

BSNT_05754___    201 AGTAAAAAAGAAAATAAAAAAGTAA    225
                     |||.||||||||.||.|||||||||
RBAM_034720__    201 AGTGAAAAAGAAGATCAAAAAGTAA    225


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