Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05760 and RBAM_034820

See Amino acid alignment / Visit BSNT_05760 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:15
# Commandline: needle
#    -asequence dna-align/BSNT_05760___ywfL.1.9828.seq
#    -bsequence dna-align/RBAM_034820___ywfL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05760___ywfL-RBAM_034820___ywfL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05760___ywfL-RBAM_034820___ywfL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05760___ywfL
# 2: RBAM_034820___ywfL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 868
# Identity:     659/868 (75.9%)
# Similarity:   659/868 (75.9%)
# Gaps:          26/868 ( 3.0%)
# Score: 2499.5
# 
#
#=======================================

BSNT_05760___      1 ATGGCAAACCAACCGATTGATTTACTGATGCAGCCGAAATGGAGAGTCAT     50
                     ||||.|||.||||||||||||||||||||||||||||..||||||.||||
RBAM_034820__      1 ATGGGAAAGCAACCGATTGATTTACTGATGCAGCCGAGCTGGAGAATCAT     50

BSNT_05760___     51 TGACCAATCCAGTCTCGGCCCTTTATTTGATGCGAAGCAATCCTTCGCAA    100
                     ||||||||||||.||||||||||..||||||||||||||.||.|||||||
RBAM_034820__     51 TGACCAATCCAGCCTCGGCCCTTATTTTGATGCGAAGCAGTCATTCGCAA    100

BSNT_05760___    101 TGGATGATACGCTGTGCATGTCCGTCGGAAAAGGCGTGTCGCCGGCGACA    150
                     |||||||||||||||||...|||||.||.|||||.|..|||||.||||||
RBAM_034820__    101 TGGATGATACGCTGTGCGCCTCCGTAGGCAAAGGGGAATCGCCTGCGACA    150

BSNT_05760___    151 GCGCGCTCATGGGTGCACCACGATACAATTGTCCTTGGAATACAGGATAC    200
                     ||.|||||.||||||||||||...||.||.||.||.||.||.|||||.||
RBAM_034820__    151 GCACGCTCTTGGGTGCACCACCGGACGATCGTGCTCGGCATTCAGGACAC    200

BSNT_05760___    201 ACGCCTCCCGTTTTTGCAGGATGGCATCTCCTTGCTGGAGAGCGAAGGAT    250
                     .|||||.||||||||..||||.|||.|....|||||||||..||||||.|
RBAM_034820__    201 GCGCCTGCCGTTTTTAGAGGACGGCGTGAAATTGCTGGAGGACGAAGGCT    250

BSNT_05760___    251 ACCGTGTGATCGTACGCAATTCCGGCGGTCTTGCCGTCGTATTGGATGAC    300
                     |||||||.||.||.|||||||||||.||.||.|||||||||.||||.||.
RBAM_034820__    251 ACCGTGTCATTGTCCGCAATTCCGGAGGCCTCGCCGTCGTACTGGACGAA    300

BSNT_05760___    301 GGTGTTTTAAATATCTCTCTCATATTCGAGGACGAAAAGAAAGGCATCGA    350
                     ||.||.||.||||||||.||.||.||.||.|||||.||.|||||||||||
RBAM_034820__    301 GGCGTATTGAATATCTCGCTTATTTTTGAAGACGAGAAAAAAGGCATCGA    350

BSNT_05760___    351 TATAGACAAAGGATATGAAGCGATGGTCGAGCTGATGAGACGAATGCTGA    400
                     .||.||||.|||.||.||.||||||...||||||.||.|.||.||||||.
RBAM_034820__    351 CATCGACAGAGGCTACGAGGCGATGACAGAGCTGGTGCGGCGGATGCTGC    400

BSNT_05760___    401 GACCGTACAACGCAAAGATCGAAGCCTATGAAATTGAAGGGTCTTATTGT    450
                     |.|||.||.|.||..|.||.|||||.|||||||||.||||.||.||.|||
RBAM_034820__    401 GTCCGCACCATGCCGAAATTGAAGCATATGAAATTAAAGGATCGTACTGT    450

BSNT_05760___    451 CCCGGCAGCTATGACCTCAGTATAAATGGCAAAAAGTTCGCCGGCATCTC    500
                     ||.|||||||||||.|||||.||....|||..|||.|||||.||.|||||
RBAM_034820__    451 CCGGGCAGCTATGATCTCAGCATCGGCGGCCGAAAATTCGCGGGAATCTC    500

BSNT_05760___    501 TCAGAGACGCGTTCGCGGCGGAGTTGCTGTTCAAATTTATCTCTGTGCGG    550
                     .||.||||||.|.||.||||||...||.|||||.|||||.|||||.||.|
RBAM_034820__    501 ACAAAGACGCCTGCGGGGCGGAACCGCGGTTCAGATTTACCTCTGCGCCG    550

BSNT_05760___    551 ATAAAAGCGGCAGTGAAAGGGCCGACTTGATCAGACGATTCTATCAAGCG    600
                     ||||||||||.||.|||.|.|||||..||||||||||.|||||||||||.
RBAM_034820__    551 ATAAAAGCGGAAGCGAACGCGCCGATCTGATCAGACGTTTCTATCAAGCC    600

BSNT_05760___    601 GCGCTGAAAGACAAACAAAACGATAAAAAAGGCGTCTATCCGGAAATACG    650
                     ||..|.|||||||||...|||||||.|||||||||.|||||.||.||.||
RBAM_034820__    601 GCTTTAAAAGACAAAAGCAACGATACAAAAGGCGTATATCCCGATATCCG    650

BSNT_05760___    651 TCCGGAAACGATGGCGTCCTTAAGTGAGCTTCTGCAAAAAGACATCTCCG    700
                     .||.|||||||||||.||.|||||.||..|.||||.||..|||||..|||
RBAM_034820__    651 GCCCGAAACGATGGCTTCATTAAGCGAATTGCTGCGAACGGACATTACCG    700

BSNT_05760___    701 TACAAGACTTAATGTT--CGCTTTATTGACGGAATTAAAAGCGTTAAGCA    748
                     |.||.|||||||||.|  |||||  |||||.|||.|.||.|...|.|||.
RBAM_034820__    701 TGCAGGACTTAATGCTGGCGCTT--TTGACTGAACTGAAGGAACTCAGCG    748

BSNT_05760___    749 CCCGTCTTTACTCTGCCGGACTGTCCATTGATGAGGAAATGGAATTTGAG    798
                     ..||.||.||..|.||||||.|.||...|||.||||||||||.||||||.
RBAM_034820__    749 GACGCCTGTATGCAGCCGGATTATCGCCTGAAGAGGAAATGGTATTTGAA    798

BSNT_05760___    799 AAAAACCTCGCCCGGATGGCT-GAGCGGAATGCAAAGGTATTTGG-----    842
                     |||||.||..||||.|| ||| ||.|||||||..|||||.||.||     
RBAM_034820__    799 AAAAATCTGACCCGAAT-GCTGGAACGGAATGAGAAGGTGTTCGGCACGC    847

BSNT_05760___    843 -GTGA-------------    846
                      | ||             
RBAM_034820__    848 AG-GAAAGCTTGGACTAA    864


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05760 and RBAM_034820

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
