Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05774 and RBAM_034920
See
Amino acid alignment /
Visit
BSNT_05774 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:16
# Commandline: needle
# -asequence dna-align/BSNT_05774___ywfC.1.9828.seq
# -bsequence dna-align/RBAM_034920___bacB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05774___ywfC-RBAM_034920___bacB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05774___ywfC-RBAM_034920___bacB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05774___ywfC
# 2: RBAM_034920___bacB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 714
# Identity: 589/714 (82.5%)
# Similarity: 589/714 (82.5%)
# Gaps: 6/714 ( 0.8%)
# Score: 2458.0
#
#
#=======================================
BSNT_05774___ 1 ---ATGAAAACTAAAGAAGATATGCAGGAGCTTTATTTCCCGACACCGAA 47
|||||||||.||.|||||.|||||||.||||||||||||||.||.||
RBAM_034920__ 1 ATGATGAAAACTGAACAAGATTTGCAGGAACTTTATTTCCCGACGCCTAA 50
BSNT_05774___ 48 ATTAATTGAATGGGAAAACGGAGTGAGGCAGTATTCAACCGTACGAGGGG 97
||||||.||||||||.||||||||.||.||.|||||..||||..||||.|
RBAM_034920__ 51 ATTAATAGAATGGGATAACGGAGTAAGACAATATTCGTCCGTCAGAGGAG 100
BSNT_05774___ 98 ATACTGAAGTATTAATGTCTTACGTCCCGCCGCATACCAATGTTGAACCC 147
||||.|||||..|..|.||||||||.|||||||||||.||.||.|||||.
RBAM_034920__ 101 ATACGGAAGTTCTGCTTTCTTACGTTCCGCCGCATACAAACGTGGAACCG 150
BSNT_05774___ 148 CATCAGCATAAGGAGGTCCAAATCGGCATGGTCGTTTCTGGCGAGCTGAT 197
||||||||||||||.||||||||||||.|.||||||||.||.||||||..
RBAM_034920__ 151 CATCAGCATAAGGAAGTCCAAATCGGCCTTGTCGTTTCCGGGGAGCTGTC 200
BSNT_05774___ 198 GATGACTGTCGGAGATGTGACAAGAAAAATGACAGCCTTGGAATCTGCCT 247
.|||||||||||||||||.||||||||.||||||||..|||||||.||||
RBAM_034920__ 201 CATGACTGTCGGAGATGTCACAAGAAAGATGACAGCGCTGGAATCAGCCT 250
BSNT_05774___ 248 ATATCGCGCCGCCGCATGTGCCTCACGGGGCAAGAAACGACACAGACCAA 297
||||||||||.||..|||||||||||||.||||||||.||.||.||.|||
RBAM_034920__ 251 ATATCGCGCCTCCTAATGTGCCTCACGGCGCAAGAAATGAGACGGATCAA 300
BSNT_05774___ 298 GAAGTGATTGCTATTGATATCAAGCGGCTGAAAGCTGATGAAACATATAC 347
||||||||.||.||||||||.||.||.||||||||.|.||||||.||.||
RBAM_034920__ 301 GAAGTGATCGCCATTGATATTAAACGCCTGAAAGCCGGTGAAACCTACAC 350
BSNT_05774___ 348 AAGTCCTGAGGACTACTTTTTGGATATTTTCAAAACAAGAGACCTGCTGC 397
|||.|||||.||.||.||||||.|||||||.|||||.||||||.|..|||
RBAM_034920__ 351 AAGCCCTGAAGATTATTTTTTGAATATTTTTAAAACGAGAGACTTATTGC 400
BSNT_05774___ 398 CGGGCATGGAAGTCACGTTCTTTGTTGAGGATTGGGTAGAAATTATGCTT 447
|.||.|||||||||||||||||.||.||.||.|||||.|||||.||||||
RBAM_034920__ 401 CCGGTATGGAAGTCACGTTCTTCGTGGAAGACTGGGTGGAAATCATGCTT 450
BSNT_05774___ 448 GCCAAAATCCCTGGAAATGGCGGAGAAATGCCTTTCCATAAACATCGGAA 497
|||||.||.||.||.||.||.|||||||||||.|||||||||||.||.||
RBAM_034920__ 451 GCCAACATTCCGGGCAACGGGGGAGAAATGCCGTTCCATAAACACCGCAA 500
BSNT_05774___ 498 TGAACAAATAGGCATCTGCATCGGCGGCGGCTATGACATGACGGTCGAAG 547
||||||.||.||||||||||||||||||||||||||.|||||..|.||||
RBAM_034920__ 501 TGAACAGATCGGCATCTGCATCGGCGGCGGCTATGATATGACCATTGAAG 550
BSNT_05774___ 548 GCTGCACAGTCGAGATGAAATTCGGCACAGCCTATTTCTGTGAGCCTCGC 597
||||||.|||.||.||||.||||||||||||.||||||||.||.||..|.
RBAM_034920__ 551 GCTGCAAAGTGGATATGACATTCGGCACAGCTTATTTCTGCGATCCGAGA 600
BSNT_05774___ 598 GAAGATCATGGTGCCATCAACCGTTCAGAAAAAGAATCAAAATCGATTAA 647
||||||||.||.|||||||||.|.|..||||||||.||||||||..|.||
RBAM_034920__ 601 GAAGATCACGGCGCCATCAACAGATTTGAAAAAGATTCAAAATCAGTCAA 650
BSNT_05774___ 648 TATCTTCTTCCCGCCGCGCTATAACAGGGCAAAAGCAAAAAAAATGAAGG 697
||||||.|||||.||||||||||||||.||||||||.||||||.|..|||
RBAM_034920__ 651 TATCTTTTTCCCTCCGCGCTATAACAGAGCAAAAGCGAAAAAATTAGAGG 700
BSNT_05774___ 698 CGGATGA---ATGA 708
||.|.|| ||||
RBAM_034920__ 701 CGAAAGAGTCATGA 714
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.