Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05839 and RBAM_035440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:21
# Commandline: needle
# -asequence dna-align/BSNT_05839.1.9828.seq
# -bsequence dna-align/RBAM_035440___ydaS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05839-RBAM_035440___ydaS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05839-RBAM_035440___ydaS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05839
# 2: RBAM_035440___ydaS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity: 196/250 (78.4%)
# Similarity: 196/250 (78.4%)
# Gaps: 5/250 ( 2.0%)
# Score: 764.0
#
#
#=======================================
BSNT_05839 1 ATGATGAGTTTTCTTATTTCACTTATCGTCGCTATTATTATCGGATGGCT 50
|||.|||||.|..|.||.||.||.|||||||||||||||||.|||.|
RBAM_035440__ 1 ---ATGGGTTTTATCGTATCTCTGATTGTCGCTATTATTATCGGCTGGAT 47
BSNT_05839 51 TGGAAGCCTGTTTGTAAAAGG-AGATATGCCCGGAGGAATTATCGGGTCT 99
.|||||..|.||||||||||| || |||||||||.|||||.||||||||.
RBAM_035440__ 48 CGGAAGTTTATTTGTAAAAGGCAG-TATGCCCGGGGGAATCATCGGGTCA 96
BSNT_05839 100 ATGATCGCAGGTCTTATAGGCGCCTGGATCGGACACGGGCTGCTTGGAAC 149
||||||||.|||||.||.|||||.||||||||.|||||.|||||.||.||
RBAM_035440__ 97 ATGATCGCCGGTCTGATCGGCGCATGGATCGGGCACGGACTGCTCGGCAC 146
BSNT_05839 150 ATGGGGGCCGCACCTAGCCGGATTTGCCATTATTCCAGCGGTAATCGGCG 199
||||||.||.|||||.|||||.||||||||.|||||.||..|.|||||.|
RBAM_035440__ 147 ATGGGGTCCTCACCTTGCCGGCTTTGCCATCATTCCGGCAATCATCGGAG 196
BSNT_05839 200 CAGCCATTGTTGTCTTTCTAGTAAGCCTGTTAACCAGAAAAAGAGGATAA 249
|.||.||.||.||.||..||.|.||||||.|..||||||..|||||||||
RBAM_035440__ 197 CTGCGATCGTGGTGTTCTTATTCAGCCTGATCGCCAGAAGCAGAGGATAA 246
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