Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05884 and RBAM_035680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:24
# Commandline: needle
# -asequence dna-align/BSNT_05884___ywaC.1.9828.seq
# -bsequence dna-align/RBAM_035680___ywaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05884___ywaC-RBAM_035680___ywaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05884___ywaC-RBAM_035680___ywaC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05884___ywaC
# 2: RBAM_035680___ywaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 638
# Identity: 522/638 (81.8%)
# Similarity: 522/638 (81.8%)
# Gaps: 10/638 ( 1.6%)
# Score: 2124.0
#
#
#=======================================
BSNT_05884___ 1 ATGGATTTATCTGTAACA---CATATGGACGATTTAAAAACAGTAATGGA 47
|||||.||.|| |||| ||||||||.|||||.|||||.||.|||||
RBAM_035680__ 1 ATGGACTTGTC---AACAGCCCATATGGATGATTTGAAAACGGTCATGGA 47
BSNT_05884___ 48 AGATTGGAAAAATGAATTATTAGTTTATAAATTTGCGCTAGATGCGCTCG 97
|||||||||||||||||||||||||||||||||.||..||||||.|||.|
RBAM_035680__ 48 AGATTGGAAAAATGAATTATTAGTTTATAAATTCGCTTTAGATGAGCTGG 97
BSNT_05884___ 98 ATACAAAGTTCTCAATTATCAGCCAGGAATATAACCTCATTCACGGACAC 147
||||.|||||.||.||||||||||||||||||||.||.||||||||.||.
RBAM_035680__ 98 ATACGAAGTTTTCTATTATCAGCCAGGAATATAATCTGATTCACGGGCAT 147
BSNT_05884___ 148 AACCCGATTGAACATACAAAATCCCGTGTCAAAAGCTTTGAAAGCATCGT 197
||||||||.||.|||||||||||.||.||.|||||.||.||.||.|||||
RBAM_035680__ 148 AACCCGATCGAGCATACAAAATCACGCGTAAAAAGTTTCGAGAGTATCGT 197
BSNT_05884___ 198 GAATAAGTTAATGAGAAAGGGCTGTGAGATTACGACGAAGGAAATGAAGG 247
.|||||..|.|||.|.||.|||||.||..|.||||||.||||||||||.|
RBAM_035680__ 198 CAATAAACTGATGCGCAAAGGCTGCGATGTGACGACGCAGGAAATGAAAG 247
BSNT_05884___ 248 AGCATATTCACGACATTGCCGGCGTGCGCATCATCTGTTCCTTTATTTCT 297
||||||||||.||.|||||.||.||..|.||.|||||||||||||||||.
RBAM_035680__ 248 AGCATATTCATGATATTGCGGGTGTCAGGATTATCTGTTCCTTTATTTCC 297
BSNT_05884___ 298 GACATTTATAATGTCG-TGAATGTGTTGAAGCAGCATGAAGATTTGAGAA 346
||.||||||||||||| || |.||.||||||||||||.|.||..|||..|
RBAM_035680__ 298 GATATTTATAATGTCGCTG-AGGTTTTGAAGCAGCATAAGGACCTGAAGA 346
BSNT_05884___ 347 TCGTAAAGGTAAAGGATTATATCCAGACA-CCCAAACCGAATGGCTATCG 395
||||||||||.||||||||||| ||.||| ||.||.|||||.|||||.||
RBAM_035680__ 347 TCGTAAAGGTGAAGGATTATAT-CAAACATCCGAAGCCGAACGGCTACCG 395
BSNT_05884___ 396 AAGCCTGCATTTAATCATTGAGATGCCTGTGAATTTAACGAACCGTGTGG 445
.|||||||||||.||.|||||.||.||.||..||||.|||||.|||||||
RBAM_035680__ 396 CAGCCTGCATTTGATTATTGAAATTCCCGTTTATTTGACGAATCGTGTGG 445
BSNT_05884___ 446 AATACGTCAAAGCAGAAATTCAAATCCGGACAATCGCGATGGATTTCTGG 495
||||.||.||.||.||||||||||||||.||.||.||.||||||||.|||
RBAM_035680__ 446 AATATGTGAAGGCGGAAATTCAAATCCGCACCATTGCCATGGATTTTTGG 495
BSNT_05884___ 496 GCGAGCCTTGAACATAAAATTTATTATAAATTGAACAATGACGTTCCTAA 545
|||||.||||||||||||||||||||.|||||.||.||.||.||.||.||
RBAM_035680__ 496 GCGAGTCTTGAACATAAAATTTATTACAAATTAAATAACGAGGTCCCAAA 545
BSNT_05884___ 546 GCAATTAACAGATGAGCTGAAGGAAGCCGCGGAGATTGCCCATTACCTAG 595
|||..|.||.||.||||||||||||||.|||||.|||||||||||..|||
RBAM_035680__ 546 GCATCTGACCGACGAGCTGAAGGAAGCGGCGGACATTGCCCATTATTTAG 595
BSNT_05884___ 596 ATGAGAAAATGCTGGGGATTAAGAAAGAAGTGGATTAG 633
|.||.||.|||||.|||||||||||||||||.|||||.
RBAM_035680__ 596 ACGAAAAGATGCTTGGGATTAAGAAAGAAGTCGATTAA 633
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