Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05948 and RBAM_036080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:27
# Commandline: needle
# -asequence dna-align/BSNT_05948___galE.1.9828.seq
# -bsequence dna-align/RBAM_036080___galE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05948___galE-RBAM_036080___galE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05948___galE-RBAM_036080___galE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05948___galE
# 2: RBAM_036080___galE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1026
# Identity: 808/1026 (78.8%)
# Similarity: 808/1026 (78.8%)
# Gaps: 15/1026 ( 1.5%)
# Score: 3154.0
#
#
#=======================================
BSNT_05948___ 1 ATGGCAATACTTGTTACTGGTGGTGCCGGGTACATTGGCAGCCACACATG 50
|||||.||..|.||.||.||.||.||.||.||.||.||.|||||||||||
RBAM_036080__ 1 ATGGCGATTTTAGTGACAGGCGGAGCGGGTTATATCGGAAGCCACACATG 50
BSNT_05948___ 51 TGTTGAATTATTGAACAGCGGCTACGAGATTGTTGTTCTTGATAATCTGT 100
|||.||..|.||.|||.|||||||.||.||.||.|||.|.||||||||||
RBAM_036080__ 51 TGTCGAGCTGTTAAACGGCGGCTATGACATCGTGGTTTTGGATAATCTGT 100
BSNT_05948___ 101 CCAACAGTTCGGCTGAGGCGCTGAACCGTGTCAAGGAGATTACGGGAAAA 150
|.||.|||||..|.||.||..||.|.|||||.||.||.|||||.||||||
RBAM_036080__ 101 CAAATAGTTCACCGGAAGCATTGGAGCGTGTGAAAGACATTACCGGAAAA 150
BSNT_05948___ 151 GATTTAACGTTCTACGAAGCGGATTTATTGGACCGGGAAGCAGTAGATGC 200
|...|...|||.||.|||||||||.|..|.|||||.||.||.||..|...
RBAM_036080__ 151 GGGCTTGTGTTTTATGAAGCGGATCTCCTTGACCGTGACGCCGTTCACCG 200
BSNT_05948___ 201 GGTTTTTGCTGAAAATGAAATCGAAGCTGTGATTCATTTTGCTGGGTTAA 250
|||.||||||||||||||.||.|||||.||.|||||||||||.||.||||
RBAM_036080__ 201 GGTGTTTGCTGAAAATGAGATTGAAGCCGTCATTCATTTTGCGGGATTAA 250
BSNT_05948___ 251 AAGCAGTCGGTGAATCTGTTGCGATTCCGCTCAAATATTATCATAACAAT 300
||||.||||||||.|||||.||..||||||||...|||||||||||.|||
RBAM_036080__ 251 AAGCTGTCGGTGAGTCTGTGGCTGTTCCGCTCCGTTATTATCATAATAAT 300
BSNT_05948___ 301 CTAACAGGAACGTTTATTTTATGTGAGGCCATGGAGAAATACGGCGTCAA 350
||.||.||||||||||||||||||||.||||||.||..|.|||||||.||
RBAM_036080__ 301 CTGACGGGAACGTTTATTTTATGTGAAGCCATGCAGGCACACGGCGTGAA 350
BSNT_05948___ 351 GAAAATTGTGTTCAGTTCATCCGCGACAGTATACGGCGTTCCGGAAACAT 400
.|||||.||.||||||||.||.|||||.||.||||||||||||||||||.
RBAM_036080__ 351 AAAAATCGTCTTCAGTTCTTCAGCGACGGTTTACGGCGTTCCGGAAACAA 400
BSNT_05948___ 401 CACCGATTACGGAGGACTTTCCATTAGGCGCGACAAATCCTTATGGGCAG 450
|.|||||.||.|||||.|||||||||.|||||||.||||||||.||||||
RBAM_036080__ 401 CGCCGATCACTGAGGATTTTCCATTAAGCGCGACCAATCCTTACGGGCAG 450
BSNT_05948___ 451 ACGAAGCTCATGCTTGAACAAATATTGCGTGACTTGCATACAGCCGACAA 500
||.|||||.|||||.|||||.||.||.||.||..||||||.|||.|||..
RBAM_036080__ 451 ACAAAGCTGATGCTGGAACAGATTTTACGCGATCTGCATAAAGCGGACTC 500
BSNT_05948___ 501 TGAGTGGAGCGTTGCGTTGCTTCGTTACTTTAACCCGTTCGGCGCGCATC 550
|||.||||||.||||..||||.||.||||||||.||||||||||||||.|
RBAM_036080__ 501 TGAATGGAGCATTGCCCTGCTCCGCTACTTTAATCCGTTCGGCGCGCACC 550
BSNT_05948___ 551 CTAGCGGACGGATCGGTGAAGACCCGAACGGAATCCCAAATAACCTTATG 600
|.|||||.||||||||.||||||||||||||.|||||.|||||..|.|||
RBAM_036080__ 551 CGAGCGGGCGGATCGGAGAAGACCCGAACGGCATCCCGAATAATTTAATG 600
BSNT_05948___ 601 CCGTATGTGGCACAGGTAGCTGTCGGGAAGCTCGAGCAATTAAGC--GTA 648
|||||..|.|||||.||.||||||||.|||||.|||||||| || ||.
RBAM_036080__ 601 CCGTACATCGCACAAGTCGCTGTCGGCAAGCTTGAGCAATT--GCAGGTG 648
BSNT_05948___ 649 TTCGGAAATGACTATCCGACAAAAGACGGGACAGGCGTACGCGATTATAT 698
||.||.|||||.|||||||||||.|||||.||.|||||.||.|||||.||
RBAM_036080__ 649 TTTGGCAATGATTATCCGACAAAGGACGGCACCGGCGTGCGGGATTACAT 698
BSNT_05948___ 699 TCACGTCGTTGATCTCGCAGAAGGCCACGTCAAGGCGCTGGAAAAAGTAT 748
.||.||||||||.||.||.||.||||||||||..|||||.|||||.||..
RBAM_036080__ 699 CCATGTCGTTGACCTTGCCGAGGGCCACGTCAGAGCGCTTGAAAAGGTGC 748
BSNT_05948___ 749 TGAACTCTACAGGAGCCGATGCATACAACCTTGGAACAGGAACAGGCTAC 798
||.||.|.||.||.|||||.||.||.||.||.||.||.||||.|||||||
RBAM_036080__ 749 TGGACACAACGGGCGCCGACGCCTATAATCTCGGCACGGGAAGAGGCTAC 798
BSNT_05948___ 799 AGCGTGCTTGAAATGGTCAAAGCCTTTGAAAAAGTGTCAGGGAAAGAGGT 848
|||||.|||||.||||||||.||.|||||||||||.||.||.|||||.||
RBAM_036080__ 799 AGCGTTCTTGAGATGGTCAAGGCGTTTGAAAAAGTATCGGGAAAAGAAGT 848
BSNT_05948___ 849 TCCGTACCGTTTTGCGGACCGCCGCCCGGGAGACATCGCCACATGCTTTG 898
.||||||||||||||.|.|||.||||||||||||||||||.|||||||.|
RBAM_036080__ 849 GCCGTACCGTTTTGCCGCCCGGCGCCCGGGAGACATCGCCGCATGCTTCG 898
BSNT_05948___ 899 CAGATCCTGCGAAAGCCAA-GCGGGATCTGGGCTGGGAAGCGAAACGCGG 947
||||.||.||.|||||.|| ||.|.|| |.|||||||||||.||.|||||
RBAM_036080__ 899 CAGACCCGGCAAAAGCAAAGGCTGAAT-TAGGCTGGGAAGCAAAGCGCGG 947
BSNT_05948___ 948 CCTTGAGGAAATGTGCGCTGATTCCTGGAGATGGCAGTCTTCTAATGTGA 997
.|||||.|||||||||||.||.||.||||..||||||||.||.|||||||
RBAM_036080__ 948 GCTTGAAGAAATGTGCGCCGACTCTTGGAAGTGGCAGTCCTCCAATGTGA 997
BSNT_05948___ 998 ATGGGT---ATAAGAGTGCGGAATAA 1020
|.|||| |.||| ||| |||
RBAM_036080__ 998 ACGGGTACCAAAAG-GTG-----TAA 1017
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